| Continuous effector CD8+ T cell production in a controlled persistent infection is sustained by a proliferative intermediate population HH Chu, SW Chan, JP Gosling, N Blanchard, A Tsitsiklis, G Lythe, ... Immunity 45 (1), 159-171, 2016 | 88 | 2016 |
| Integrated host-microbe plasma metagenomics for sepsis diagnosis in a prospective cohort of critically ill adults KL Kalantar, L Neyton, M Abdelghany, E Mick, A Jauregui, S Caldera, ... Nature microbiology 7 (11), 1805-1816, 2022 | 79 | 2022 |
| Tracheal aspirate RNA sequencing identifies distinct immunological features of COVID-19 ARDS A Sarma, SA Christenson, A Byrne, E Mick, AO Pisco, C DeVoe, T Deiss, ... Nature communications 12 (1), 5152, 2021 | 67 | 2021 |
| Lower respiratory tract infections in children requiring mechanical ventilation: a multicentre prospective surveillance study incorporating airway metagenomics A Tsitsiklis, CM Osborne, J Kamm, K Williamson, K Kalantar, G Dudas, ... The Lancet Microbe 3 (4), e284-e293, 2022 | 45 | 2022 |
| Impaired immune signaling and changes in the lung microbiome precede secondary bacterial pneumonia in COVID-19 A Tsitsiklis, BS Zha, A Byrne, C Devoe, S Levan, E Rackaityte, S Sunshine, ... Research Square, rs. 3. rs-380803, 2021 | 30 | 2021 |
| CD8+ T cell responses to Toxoplasma gondii: lessons from a successful parasite A Tsitsiklis, DJ Bangs, EA Robey Trends in parasitology 35 (11), 887-898, 2019 | 29 | 2019 |
| Multi-omic longitudinal study reveals immune correlates of clinical course among hospitalized COVID-19 patients J Diray-Arce, S Fourati, ND Jayavelu, R Patel, C Maguire, AC Chang, ... Cell Reports Medicine 4 (6), 2023 | 28 | 2023 |
| Integrated host/microbe metagenomics enables accurate lower respiratory tract infection diagnosis in critically ill children E Mick, A Tsitsiklis, J Kamm, KL Kalantar, S Caldera, A Lyden, M Tan, ... The Journal of clinical investigation 133 (7), 2023 | 26 | 2023 |
| CXCR3 regulates stem and proliferative CD8+ T cells during chronic infection by promoting interactions with DCs in splenic bridging channels DJ Bangs, A Tsitsiklis, Z Steier, SW Chan, J Kaminski, A Streets, N Yosef, ... Cell reports 38 (3), 2022 | 25 | 2022 |
| Launching a saliva-based SARS-CoV-2 surveillance testing program on a university campus AJ Ehrenberg, EA Moehle, CE Brook, AH Doudna Cate, LB Witkowsky, ... PLoS One 16 (5), e0251296, 2021 | 22 | 2021 |
| An unusual MHC molecule generates protective CD8+ T cell responses to chronic infection A Tsitsiklis, DJ Bangs, LK Lutes, SW Chan, KM Geiger, AJ Modzelewski, ... Frontiers in Immunology 11, 1464, 2020 | 11 | 2020 |
| Upper airway gene expression shows a more robust adaptive immune response to SARS-CoV-2 in children E Mick, A Tsitsiklis, N Spottiswoode, S Caldera, PH Serpa, AM Detweiler, ... Nature Communications 13 (1), 3937, 2022 | 10 | 2022 |
| The antibiotic resistance reservoir of the lung microbiome expands with age in a population of critically ill patients VT Chu, A Tsitsiklis, E Mick, L Ambroggio, KL Kalantar, A Glascock, ... Nature communications 15 (1), 92, 2024 | 9* | 2024 |
| Physical activity associates with lower systemic inflammatory gene expression in rheumatoid arthritis SL Patterson, S Sun, D Rychkov, P Katz, A Tsitsiklis, MC Nakamura, ... The Journal of rheumatology 49 (12), 1320-1327, 2022 | 9 | 2022 |
| Integrated hostmicrobe plasma metagenomics for sepsis diagnosis in a prospective cohort of critically ill adults. Nat Microbiol 7: 1805–1816 KL Kalantar, L Neyton, M Abdelghany, E Mick, A Jauregui, S Caldera, ... | 8 | 2022 |
| Host-microbe multiomic profiling reveals age-dependent immune dysregulation associated with COVID-19 immunopathology HV Phan, A Tsitsiklis, CP Maguire, EK Haddad, PM Becker, ... Science translational medicine 16 (743), eadj5154, 2024 | 7 | 2024 |
| Upper airway gene expression reveals a more robust innate and adaptive immune response to SARS-CoV-2 in children compared with older adults E Mick, A Tsitsiklis, N Spottiswoode, S Caldera, PH Serpa, AM Detweiler, ... Research Square, rs. 3. rs-784784, 2021 | 6 | 2021 |
| A myeloid program associated with COVID-19 severity is decreased by therapeutic blockade of IL-6 signaling JA Hackney, H Shivram, J Vander Heiden, C Overall, L Orozco, X Gao, ... Iscience 26 (10), 2023 | 4 | 2023 |
| A 2-gene host signature for improved accuracy of COVID-19 diagnosis agnostic to viral variants J Albright, E Mick, E Sanchez-Guerrero, J Kamm, A Mitchell, AM Detweiler, ... Msystems 8 (1), e00671-22, 2023 | 4 | 2023 |
| Antimicrobial Resistance in the Upper Respiratory Tract of Children Compared with Adults VT Chu, K Kalantar, E Mick, A Tsitsiklis, N Spottiswoode, JL DeRisi, ... Journal of the Pediatric Infectious Diseases Society 12 (Supplement_1), S2-S3, 2023 | 1 | 2023 |
