Philip Bradley

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David BakerUniversity of WashingtonDirección de correo verificada de uw.edu
Paul G. ThomasDepartments of Host-Microbe Interactions and Immunology, St. Jude Children's Research HospitalDirección de correo verificada de stjude.org
Rhiju DasHHMI & Stanford UniversityDirección de correo verificada de stanford.edu
Brian KuhlmanUniversity of North CarolinaDirección de correo verificada de email.unc.edu
Andrew Leaver-FayResearch Assistant Professor, Biochemistry, UNCDirección de correo verificada de email.unc.edu
Tomer HertzDepartment of Immunology, Microbiology and Genetics, Ben-Gurion University of the NegevDirección de correo verificada de bgu.ac.il
Lars MalmströmUZHDirección de correo verificada de uzh.ch
Chu WangPeking UniversityDirección de correo verificada de pku.edu.cn
Ingemar AndréAssociate professor, Lund UniversityDirección de correo verificada de biochemistry.lu.se
Matthew O'MearaUniversity of MichiganDirección de correo verificada de umich.edu
Tanja KortemmeUCSFDirección de correo verificada de cgl.ucsf.edu
Adam J BogdanoveProfessor of Plant Pathology and Plant-Microbe Biology, Cornell UniversityDirección de correo verificada de cornell.edu
Charlie E M StraussLos Alamos National LaboratoryDirección de correo verificada de lanl.gov
Chen YanoverKI Research InstituteDirección de correo verificada de kinstitute.org.il
Ora Schueler-FurmanHebrew University, Jerusalem, IsraelDirección de correo verificada de mail.huji.ac.il
Michael TykaGoogle Inc.Dirección de correo verificada de google.com
Srivatsan RamanAssistant Professor, University of Wisconsin-MadisonDirección de correo verificada de wisc.edu
Paul Martin MurphyUniversity of California - San DiegoDirección de correo verificada de ucsd.edu
Lenore J. CowenProfessor of Computer Science, Tufts UniversityDirección de correo verificada de cs.tufts.edu
Jens MeilerVanderbilt University & University LeipzigDirección de correo verificada de meilerlab.org

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Philip Bradley

Fred Hutchinson Cancer Research Center

Dirección de correo verificada de fredhutch.org

computational biology protein design protein-DNA interactions immune repertoires


Título Ordenar por citas Ordenar por año Ordenar por título	Citado por Citado por	Año
ROSETTA3: an object-oriented software suite for the simulation and design of macromolecules A Leaver-Fay, M Tyka, SM Lewis, OF Lange, J Thompson, R Jacak, ... Methods in enzymology 487, 545-574, 2011	2064	2011
The Rosetta all-atom energy function for macromolecular modeling and design RF Alford, A Leaver-Fay, JR Jeliazkov, MJ O’Meara, FP DiMaio, H Park, ... Journal of chemical theory and computation 13 (6), 3031-3048, 2017	1494	2017
Toward high-resolution de novo structure prediction for small proteins P Bradley, KMS Misura, D Baker Science 309 (5742), 1868-1871, 2005	1139	2005
Quantifiable predictive features define epitope-specific T cell receptor repertoires P Dash, AJ Fiore-Gartland, T Hertz, GC Wang, S Sharma, A Souquette, ... Nature 547 (7661), 89-93, 2017	861	2017
Advances in protein structure prediction and design B Kuhlman, P Bradley Nature reviews molecular cell biology 20 (11), 681-697, 2019	840	2019
The crystal structure of TAL effector PthXo1 bound to its DNA target ANS Mak, P Bradley, RA Cernadas, AJ Bogdanove, BL Stoddard Science 335 (6069), 716-719, 2012	765	2012
Macromolecular modeling and design in Rosetta: recent methods and frameworks JK Leman, BD Weitzner, SM Lewis, J Adolf-Bryfogle, N Alam, RF Alford, ... Nature methods 17 (7), 665-680, 2020	732	2020
Protein–protein docking with backbone flexibility C Wang, P Bradley, D Baker Journal of molecular biology 373 (2), 503-519, 2007	496	2007
Simultaneous optimization of biomolecular energy functions on features from small molecules and macromolecules H Park, P Bradley, P Greisen Jr, Y Liu, VK Mulligan, DE Kim, D Baker, ... Journal of chemical theory and computation 12 (12), 6201-6212, 2016	495	2016
High-resolution structure prediction and the crystallographic phase problem B Qian, S Raman, R Das, P Bradley, AJ McCoy, RJ Read, D Baker Nature 450 (7167), 259-264, 2007	389	2007
Progress in modeling of protein structures and interactions O Schueler-Furman, C Wang, P Bradley, K Misura, D Baker science 310 (5748), 638-642, 2005	375	2005
Automated prediction of CASP‐5 structures using the Robetta server D Chivian, DE Kim, L Malmström, P Bradley, T Robertson, P Murphy, ... Proteins: Structure, Function, and Bioinformatics 53 (S6), 524-533, 2003	374	2003
Assigning function to yeast proteins by integration of technologies TR Hazbun, L Malmström, S Anderson, BJ Graczyk, B Fox, M Riffle, ... Molecular cell 12 (6), 1353-1365, 2003	340	2003
De novo prediction of three-dimensional structures for major protein families R Bonneau, CEM Strauss, CA Rohl, D Chivian, P Bradley, L Malmström, ... Journal of molecular biology 322 (1), 65-78, 2002	337	2002
U2AF1 mutations alter splice site recognition in hematological malignancies JO Ilagan, A Ramakrishnan, B Hayes, ME Murphy, AS Zebari, P Bradley, ... Genome research 25 (1), 14-26, 2015	330	2015
Structure prediction for CASP7 targets using extensive all‐atom refinement with Rosetta@ home R Das, B Qian, S Raman, R Vernon, J Thompson, P Bradley, S Khare, ... Proteins: Structure, Function, and Bioinformatics 69 (S8), 118-128, 2007	282	2007
Combined covalent-electrostatic model of hydrogen bonding improves structure prediction with Rosetta MJ O’Meara, A Leaver-Fay, MD Tyka, A Stein, K Houlihan, F DiMaio, ... Journal of chemical theory and computation 11 (2), 609-622, 2015	267	2015
Modeling symmetric macromolecular structures in Rosetta3 F DiMaio, A Leaver-Fay, P Bradley, D Baker, I André PloS one 6 (6), e20450, 2011	259	2011
Rosetta predictions in CASP5: successes, failures, and prospects for complete automation P Bradley, D Chivian, J Meiler, KMS Misura, CA Rohl, WR Schief, ... Proteins: Structure, Function, and Bioinformatics 53 (S6), 457-468, 2003	251	2003
The kinase mTOR modulates the antibody response to provide cross-protective immunity to lethal infection with influenza virus R Keating, T Hertz, M Wehenkel, TL Harris, BA Edwards, JL McClaren, ... Nature immunology 14 (12), 1266-1276, 2013	208	2013

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