Josh T Cuperus

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Christine QueitschUniversity of WashingtonDirección de correo verificada de uw.edu
James C. CarringtonDonald Danforth Plant Science CenterDirección de correo verificada de danforthcenter.org
Noah FahlgrenDonald Danforth Plant Science CenterDirección de correo verificada de danforthcenter.org
Stanley FieldsDirección de correo verificada de uw.edu
Taiowa MontgomeryColorado State UniversityDirección de correo verificada de colostate.edu
Michael DorrityGroup Leader, EMBL HeidelbergDirección de correo verificada de embl.de
Hernan Garcia-RuizUniversity of Nebraska-LincolnDirección de correo verificada de unl.edu
Tobias JoresHeinrich Heine University DüsseldorfDirección de correo verificada de hhu.de
Christopher M. SullivanCollege of Earth, Ocean, and Atmospheric Sciences - Oregon State UniversityDirección de correo verificada de oregonstate.edu
Alberto CarbonellInstituto de Biología Molecular y Celular de Plantas (IBMCP)Dirección de correo verificada de ibmcp.upv.es
Elisabeth ChapmanLand O'Lakes | Winfield UnitedDirección de correo verificada de foragegenetics.com
Kerrigan GilbertDonald Danforth Plant Science CenterDirección de correo verificada de danforthcenter.org
Atsushi TakedaProfessor, Ritsumeikan UniversityDirección de correo verificada de fc.ritsumei.ac.jp
Dawei LiProfessor, College of Biological Sciences, China Agricultural University, Beijing, ChinaDirección de correo verificada de cau.edu.cn
José L. McFaline-FigueroaAssistant Professor of Biomedical Engineering, Columbia UniversityDirección de correo verificada de columbia.edu
Detlef WeigelMax Planck Institute for Biology TübingenDirección de correo verificada de weigelworld.org
matteo pellegriniuniversity of california Los AngelesDirección de correo verificada de mcdb.ucla.edu
Steven E. JacobsenUCLADirección de correo verificada de ucla.edu

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Josh T Cuperus

Research Assistant Professor, University of Washington, Genome Sciences Department

Dirección de correo verificada de uw.edu

Cell Biology Bioinformatics microRNA Genomics small RNA


Título Ordenar por citas Ordenar por año Ordenar por título	Citado por Citado por	Año
Specificity of ARGONAUTE7-miR390 interaction and dual functionality in TAS3 trans-acting siRNA formation TA Montgomery, MD Howell, JT Cuperus, D Li, JE Hansen, AL Alexander, ... Cell 133 (1), 128-141, 2008	915	2008
Evolution and Functional Diversification of MIRNA Genes JT Cuperus, N Fahlgren, JC Carrington The Plant Cell 23 (2), 431-442, 2011	861	2011
Unique functionality of 22-nt miRNAs in triggering RDR6-dependent siRNA biogenesis from target transcripts in Arabidopsis JT Cuperus, A Carbonell, N Fahlgren, H Garcia-Ruiz, RT Burke, A Takeda, ... Nature structural & molecular biology 17 (8), 997-1003, 2010	491	2010
Dynamics of Gene Expression in Single Root Cells of Arabidopsis thaliana K Jean-Baptiste, JL McFaline-Figueroa, CM Alexandre, MW Dorrity, ... The plant cell 31 (5), 993-1011, 2019	356	2019
Functional Analysis of Three Arabidopsis ARGONAUTES Using Slicer-Defective Mutants A Carbonell, N Fahlgren, H Garcia-Ruiz, KB Gilbert, TA Montgomery, ... The Plant Cell 24 (9), 3613-3629, 2012	306	2012
Deep learning of the regulatory grammar of yeast 5′ untranslated regions from 500,000 random sequences JT Cuperus, B Groves, A Kuchina, AB Rosenberg, N Jojic, S Fields, ... Genome research 27 (12), 2015-2024, 2017	222	2017
Identification of MIR390a precursor processing-defective mutants in Arabidopsis by direct genome sequencing JT Cuperus, TA Montgomery, N Fahlgren, RT Burke, T Townsend, ... Proceedings of the National Academy of Sciences 107 (1), 466-471, 2010	170	2010
New generation of artificial MicroRNA and synthetic trans-acting small interfering RNA vectors for efficient gene silencing in Arabidopsis A Carbonell, A Takeda, N Fahlgren, SC Johnson, JT Cuperus, ... Plant physiology 165 (1), 15-29, 2014	160	2014
IMPa-4, an Arabidopsis Importin α Isoform, Is Preferentially Involved in Agrobacterium-Mediated Plant Transformation S Bhattacharjee, LY Lee, H Oltmanns, H Cao, null Veena, J Cuperus, ... The Plant Cell 20 (10), 2661-2680, 2008	159	2008
Synthetic promoter designs enabled by a comprehensive analysis of plant core promoters T Jores, J Tonnies, T Wrightsman, ES Buckler, JT Cuperus, S Fields, ... Nature Plants 7 (6), 842-855, 2021	133	2021
Regulation and functional specialization of small RNA–target nodes during plant development I Rubio-Somoza, JT Cuperus, D Weigel, JC Carrington Current opinion in plant biology 12 (5), 622-627, 2009	131	2009
The regulatory landscape of Arabidopsis thaliana roots at single-cell resolution MW Dorrity, CM Alexandre, MO Hamm, AL Vigil, S Fields, C Queitsch, ... Nature communications 12 (1), 3334, 2021	129	2021
A single-cell view of the transcriptome during lateral root initiation in Arabidopsis thaliana HP Gala, A Lanctot, K Jean-Baptiste, S Guiziou, JC Chu, JE Zemke, ... The Plant Cell 33 (7), 2197-2220, 2021	109	2021
Identification of genes required for de novo DNA methylation in Arabidopsis MVC Greenberg, I Ausin, SWL Chan, SJ Cokus, JT Cuperus, S Feng, ... Epigenetics 6 (3), 344-354, 2011	93	2011
Identification of plant enhancers and their constituent elements by STARR-seq in tobacco leaves T Jores, J Tonnies, MW Dorrity, JT Cuperus, S Fields, C Queitsch The Plant Cell 32 (7), 2120-2131, 2020	77	2020
Phytophthora have distinct endogenous small RNA populations that include short interfering and microRNAs N Fahlgren, SR Bollmann, KD Kasschau, JT Cuperus, CM Press, ... PLoS One 8 (10), e77181, 2013	75	2013
Agrobacterium rhizogenes GALLS Protein Substitutes for Agrobacterium tumefaciens Single-Stranded DNA-Binding Protein VirE2 LD Hodges, J Cuperus, W Ream Journal of bacteriology 186 (10), 3065-3077, 2004	68	2004
Single-cell genomics in plants: current state, future directions, and hurdles to overcome JT Cuperus Plant Physiology 188 (2), 749-755, 2022	43	2022
Translation Start Sequences Affect the Efficiency of Silencing of Agrobacterium tumefaciens T-DNA Oncogenes H Lee, JL Humann, JS Pitrak, JT Cuperus, TD Parks, CA Whistler, ... Plant physiology 133 (3), 966-977, 2003	43	2003
Complex Relationships between Chromatin Accessibility, Sequence Divergence, and Gene Expression in Arabidopsis thaliana CM Alexandre, JR Urton, K Jean-Baptiste, J Huddleston, MW Dorrity, ... Molecular Biology and Evolution 35 (4), 837-854, 2018	37	2018

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