Andre Lamurias

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Francisco M CoutoLASIGE, Departamento de Informática, Faculdade de Ciências, Universidade de Lisboa, PortugalDirección de correo verificada de campus.ul.pt
Luka A. ClarkeBIOISI: Biosystems & Integrative Sciences Institute, University of Lisbon, PortugalDirección de correo verificada de fc.ul.pt
Diana F. SousaEuropean Commission, Joint Research Centre (JRC)Dirección de correo verificada de ec.europa.eu
Thomas Dyhre NielsenAalborg UniversityDirección de correo verificada de cs.aau.dk
Katja HoseProfessor, TU WienDirección de correo verificada de tuwien.ac.at
João D FerreiraLASIGE, Departamento de Informática, Faculdade de Ciências, Universidade de LisboaDirección de correo verificada de fc.ul.pt
Pedro RuasLASIGE, Faculdade de Ciências, Universidade de LisboaDirección de correo verificada de fc.ul.pt
Mads AlbertsenAlbertsen lab, Department of Chemistry and Bioscience, Aalborg UniversityDirección de correo verificada de bio.aau.dk
Mantas SereikaAalborg UniversityDirección de correo verificada de bio.aau.dk
Márcia BarrosLASIGE, Informática, Faculdade de Ciências, Universidade de LisboaDirección de correo verificada de fc.ul.pt
Marta A. AntunesPhD student at cE3c - Faculty of Sciences, University of LisbonDirección de correo verificada de alunos.fc.ul.pt
Alessandro TiboAstraZenecaDirección de correo verificada de astrazeneca.com
Tiago GregoUniversity of CambridgeDirección de correo verificada de cam.ac.uk
Miguel J. RodriguesLaSIGE, Departamento de Informática, Faculdade de Ciências, Universidade de LisboaDirección de correo verificada de lasige.di.fc.ul.pt

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Andre Lamurias

NOVA LINCS, NOVA School of Science and Technology

Dirección de correo verificada de fct.unl.pt - Página principal

bioinformatics machine learning natural language processing text mining ontologies


Título Ordenar por citas Ordenar por año Ordenar por título	Citado por Citado por	Año
The CHEMDNER corpus of chemicals and drugs and its annotation principles M Krallinger, O Rabal, F Leitner, M Vazquez, D Salgado, Z Lu, R Leaman, ... Journal of cheminformatics 7, 1-17, 2015	379	2015
BO-LSTM: classifying relations via long short-term memory networks along biomedical ontologies A Lamurias, D Sousa, LA Clarke, FM Couto BMC bioinformatics 20, 1-12, 2019	76	2019
Extracting microRNA-gene relations from biomedical literature using distant supervision A Lamurias, LA Clarke, FM Couto PloS one 12 (3), e0171929, 2017	55	2017
A silver standard corpus of human phenotype-gene relations D Sousa, A Lamúrias, FM Couto arXiv preprint arXiv:1903.10728, 2019	51	2019
Text Mining for Bioinformatics Using Biomedical Literature A Lamurias, FM Couto	51	2019
MER: a shell script and annotation server for minimal named entity recognition and linking FM Couto, A Lamurias Journal of cheminformatics 10, 1-10, 2018	48	2018
Identifying human phenotype terms by combining machine learning and validation rules M Lobo, A Lamurias, FM Couto BioMed Research International 2017 (1), 8565739, 2017	45	2017
Semantic Similarity Definition FM Couto, A Lamurias	42	2019
Metagenomic binning with assembly graph embeddings A Lamurias, M Sereika, M Albertsen, K Hose, TD Nielsen Bioinformatics 38 (19), 4481–4487, 2022	36	2022
Improving chemical entity recognition through h-index based semantic similarity A Lamurias, JD Ferreira, FM Couto Journal of cheminformatics 7, 1-9, 2015	29	2015
Chemical compound and drug name recognition using CRFs and semantic similarity based on ChEBI A Lamurias, T Grego, FM Couto BioCreative Challenge Evaluation Workshop 2, 75, 2013	25	2013
PPR-SSM: personalized PageRank and semantic similarity measures for entity linking A Lamurias, P Ruas, FM Couto BMC bioinformatics 20, 1-12, 2019	21	2019
Lasigebiotm at MEDIQA 2019: biomedical question answering using bidirectional transformers and named entity recognition A Lamurias, FM Couto Proceedings of the 18th BioNLP workshop and shared task, 523-527, 2019	20	2019
An extended overview of the CLEF 2020 ChEMU lab: information extraction of chemical reactions from patents J He, DQ Nguyen, SA Akhondi, C Druckenbrodt, C Thorne, R Hoessel, ... Proceedings of the CLEF 2020 conference, 2020	19	2020
Linking chemical and disease entities to ontologies by integrating PageRank with extracted relations from literature P Ruas, A Lamurias, FM Couto Journal of Cheminformatics 12, 1-11, 2020	17	2020
MER: a minimal named-entity recognition tagger and annotation server FM Couto, LF Campos, A Lamurias Proceedings of the BioCreative 5, 130-137, 2017	17	2017
Using neural networks for relation extraction from biomedical literature D Sousa, A Lamurias, FM Couto Artificial Neural Networks, 289-305, 2021	15	2021
Generating biomedical question answering corpora from Q&A forums A Lamurias, D Sousa, FM Couto IEEE Access 8, 161042-161051, 2020	15	2020
Generating a Tolerogenic Cell Therapy Knowledge Graph from Literature A Lamurias, JD Ferreira, LA Clarke, FM Couto Frontiers in immunology 8, 1656, 2017	13	2017
ULISBOA at SemEval-2016 Task 12: Extraction of temporal expressions, clinical events and relations using IBEnt M Barros, A Lamurias, G Figueiro, M Antunes, J Teixeira, A Pinheiro, ...	12	2016

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