Henrik Nielsen

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Søren BrunakProfessor of Disease Systems Biology, University of CopenhagenDirección de correo verificada de cpr.ku.dk
Gunnar von HeijneStockholm UniversityDirección de correo verificada de dbb.su.se
Ole WintherBiology, Univ of Copenhagen, Genomic Medicine, Rigshospitalet and Technical University of DenmarkDirección de correo verificada de bio.ku.dk
José Juan Almagro ArmenterosPostdoc, Stanford UniversityDirección de correo verificada de stanford.edu
Olof EmanuelssonAssociate professor, Royal Institute of Technology (KTH), StockholmDirección de correo verificada de kth.se
Alexander JohansenStanford UniversityDirección de correo verificada de stanford.edu
Casper Kaae Sønderby[email protected], ML/DL Research ScientistDirección de correo verificada de twig.energy
Jacob EngelbrechtSenior Advisor, Danish Ministry of TaxationDirección de correo verificada de engelbrecht.dk
Konstantinos Tsirigos, PhD Bioinforma...DTU BiosustainDirección de correo verificada de dtu.dk
Thomas Nordahl PetersenDTU Food, National Food Institute, DenmarkDirección de correo verificada de food.dtu.dk
Anders KroghDepartment of Computer Science and Center for Health Data Science, University of CopenhagenDirección de correo verificada de di.ku.dk
Claus A. AndersenSr.Dir. Strategic Developement and Digital TransformationDirección de correo verificada de novonordisk.com
Søren Kaae SønderbyDirección de correo verificada de twig.energy
Morten NielsenDepartment of Health Technology, The Technical University ofDirección de correo verificada de cbs.dtu.dk
Pierre BaldiProfessor, University of California, IrvineDirección de correo verificada de ics.uci.edu
Vanessa JurtzNovo Nordisk A/SDirección de correo verificada de novonordisk.com
Tracy PalmerProfessor of Microbiology, Newcastle UniversityDirección de correo verificada de newcastle.ac.uk
Lars Juhl JensenUniversity of CopenhagenDirección de correo verificada de cpr.ku.dk
Nikolaj Sorgenfrei BlomSenior Researcher, DTUDirección de correo verificada de dtu.dk
Alfonso ValenciaICREA Professor. Barcelona Supercomputing Center.Dirección de correo verificada de bsc.es

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Henrik Nielsen

Associate Professor, Department of Health Technology, Technical University of Denmark

Dirección de correo verificada de dtu.dk - Página principal

Bioinformatics Signal Peptides Protein Sorting Introns Start Codons


Título Ordenar por citas Ordenar por año Ordenar por título	Citado por Citado por	Año
SignalP 4.0: discriminating signal peptides from transmembrane regions TN Petersen, S Brunak, G Von Heijne, H Nielsen Nature methods 8 (10), 785-786, 2011	10273	2011
Improved prediction of signal peptides: SignalP 3.0 JD Bendtsen, H Nielsen, G Von Heijne, S Brunak Journal of molecular biology 340 (4), 783-795, 2004	8023	2004
Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites. H Nielsen, J Engelbrecht, S Brunak, G Von Heijne Protein engineering 10 (1), 1-6, 1997	6807	1997
Predicting subcellular localization of proteins based on their N-terminal amino acid sequence O Emanuelsson, H Nielsen, S Brunak, G Von Heijne Journal of molecular biology 300 (4), 1005-1016, 2000	5228	2000
Locating proteins in the cell using TargetP, SignalP and related tools O Emanuelsson, S Brunak, G von Heijne, H Nielsen Nature protocols 2 (4), 953-971, 2007	3845	2007
SignalP 5.0 improves signal peptide predictions using deep neural networks JJ Almagro Armenteros, KD Tsirigos, CK Sønderby, TN Petersen, ... Nature biotechnology 37 (4), 420-423, 2019	2900	2019
Assessing the accuracy of prediction algorithms for classification: an overview P Baldi, S Brunak, Y Chauvin, CAF Andersen, H Nielsen Bioinformatics 16 (5), 412-424, 2000	2754	2000
ChloroP, a neural network‐based method for predicting chloroplast transit peptides and their cleavage sites O Emanuelsson, H Nielsen, GV Heijne Protein Science 8 (5), 978-984, 1999	2175	1999
SignalP 6.0 predicts all five types of signal peptides using protein language models F Teufel, JJ Almagro Armenteros, AR Johansen, MH Gíslason, SI Pihl, ... Nature biotechnology 40 (7), 1023-1025, 2022	1670	2022
Prediction of lipoprotein signal peptides in Gram‐negative bacteria AS Juncker, H Willenbrock, G Von Heijne, S Brunak, H Nielsen, A Krogh Protein Science 12 (8), 1652-1662, 2003	1347	2003
DeepLoc: prediction of protein subcellular localization using deep learning JJ Almagro Armenteros, CK Sønderby, SK Sønderby, H Nielsen, ... Bioinformatics 33 (21), 3387-3395, 2017	1161	2017
Predicting Secretory Proteins with SignalP H Nielsen Protein Function Prediction. Methods in Molecular Biology 1611, 59-73, 2017	952	2017
Detecting sequence signals in targeting peptides using deep learning JJA Armenteros, M Salvatore, O Emanuelsson, O Winther, G Von Heijne, ... Life science alliance 2 (5), 2019	861	2019
A neural network method for identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites H Nielsen, J Engelbrecht, S Brunak, G Von Heijne International Journal of Neural Systems 8 (5-6), 581-599, 1997	851	1997
Machine learning approaches for the prediction of signal peptides and other protein sorting signals H Nielsen, S Brunak, G von Heijne Protein engineering 12 (1), 3-9, 1999	807	1999
Prediction of signal peptides and signal anchors by a hidden Markov model. H Nielsen, A Krogh Ismb 6, 122-130, 1998	741	1998
Prediction of twin-arginine signal peptides JD Bendtsen, H Nielsen, D Widdick, T Palmer, S Brunak BMC bioinformatics 6, 1-9, 2005	618	2005
NetSurfP‐2.0: Improved prediction of protein structural features by integrated deep learning MS Klausen, MC Jespersen, H Nielsen, KK Jensen, VI Jurtz, ... Proteins: Structure, Function, and Bioinformatics 87 (6), 520-527, 2019	598	2019
Prediction of human protein function from post-translational modifications and localization features LJ Jensen, R Gupta, N Blom, D Devos, J Tamames, C Kesmir, H Nielsen, ... Journal of molecular biology 319 (5), 1257-1265, 2002	470	2002
Neural network prediction of translation initiation sites in eukaryotes: perspectives for EST and genome analysis. AG Pedersen, H Nielsen Ismb 5, 226-233, 1997	401	1997

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