| Community-led, integrated, reproducible multi-omics with anvi’o AM Eren, E Kiefl, A Shaiber, I Veseli, SE Miller, MS Schechter, I Fink, ... Nature microbiology 6 (1), 3-6, 2021 | 637 | 2021 |
| Functional and genetic markers of niche partitioning among enigmatic members of the human oral microbiome A Shaiber, AD Willis, TO Delmont, S Roux, LX Chen, AC Schmid, ... Genome biology 21, 1-35, 2020 | 180 | 2020 |
| Community-led, integrated, reproducible multi-omics with anvi’o. Nat Microbiol 6: 3–6 AM Eren, E Kiefl, A Shaiber, I Veseli, SE Miller, MS Schechter, I Fink, ... | 118 | 2021 |
| Statistically learning the functional landscape of microbial communities A Skwara, K Gowda, M Yousef, J Diaz-Colunga, AS Raman, A Sanchez, ... Nature ecology & evolution 7 (11), 1823-1833, 2023 | 38 | 2023 |
| Impact of KRAS mutations and co-mutations on clinical outcomes in pancreatic ductal adenocarcinoma A Yousef, M Yousef, S Chowdhury, K Abdilleh, M Knafl, P Edelkamp, ... NPJ Precision Oncology 8 (1), 27, 2024 | 37 | 2024 |
| Early-Life Microbial Restitution Reduces Colitis Risk Promoted by Antibiotic-Induced Gut Dysbiosis in Interleukin 10–/–Mice J Miyoshi, S Miyoshi, TO Delmont, C Cham, STM Lee, A Sakatani, K Yang, ... Gastroenterology 161 (3), 940-952. e15, 2021 | 28 | 2021 |
| The relative prevalence of the Omicron variant within SARS-CoV-2 infected cohorts in different countries: a systematic review A Sarkar, S Omar, A Alshareef, K Fanous, S Sarker, H Alroobi, F Zamir, ... Human Vaccines & Immunotherapeutics 19 (1), 2212568, 2023 | 26 | 2023 |
| Community-led, integrated, reproducible multi-omics with anvi’o. Nat Microbiol. 2021; 6: 3–6 AM Eren, E Kiefl, A Shaiber, I Veseli, SE Miller, MS Schechter, I Fink, ... | 12 | |
| Serum tumor markers and outcomes in patients with Appendiceal Adenocarcinoma A Yousef, M Yousef, MA Zeineddine, A More, M Fanaeian, S Chowdhury, ... JAMA Network Open 7 (2), e240260-e240260, 2024 | 11 | 2024 |
| The effect of microbiome therapy on COVID-19-induced gut dysbiosis: A narrative and systematic review M Yousef, M Rob, S Varghese, S Rao, F Zamir, P Paul, A Chaari Life Sciences, 122535, 2024 | 7 | 2024 |
| Transient suppression of bacterial populations associated with gut health is critical in success of exclusive enteral nutrition for children with Crohn’s disease J Runde, I Veseli, EC Fogarty, AR Watson, Q Clayssen, M Yosef, ... Journal of Crohn's and Colitis 17 (7), 1103-1113, 2023 | 6 | 2023 |
| Learning the functional landscape of microbial communities A Skwara, K Gowda, M Yousef, J Diaz-Colunga, AS Raman, A Sanchez, ... bioRxiv, 2023.03. 24.534159, 2023 | 5 | 2023 |
| Molecular, socioeconomic, and clinical factors affecting racial and ethnic disparities in colorectal cancer survival M Yousef, A Yousef, S Chowdhury, MM Fanaeian, M Knafl, J Peterson, ... JAMA oncology 10 (11), 1519-1529, 2024 | 3 | 2024 |
| Automated, High-Throughput Platform to Generate a High-Reliability, Comprehensive Rectal Cancer Database N Bhutiani, MMG Yousef, A Yousef, M Zeineddine, M Knafl, O Ratliff, ... JCO Clinical Cancer Informatics 8, e2300219, 2024 | 3 | 2024 |
| Deep learning for surgical instrument recognition and segmentation in robotic-assisted surgeries: a systematic review FA Ahmed, M Yousef, MA Ahmed, HO Ali, A Mahboob, H Ali, Z Shah, ... Artificial Intelligence Review 58 (1), 1, 2024 | 2 | 2024 |
| Immunotherapy for Parkinson’s disease and Alzheimer’s disease: A promising disease-modifying therapy A Mahboob, H Ali, AJ AlNaimi, M Yousef, M Rob, NA Al-Muhannadi, ... Cells 13 (18), 1527, 2024 | 2 | 2024 |
| Impact of KRAS Mutations and Co-mutations on Clinical Outcome in Pancreatic Ductal Adenocarcinoma. D Zhao, A Yousef, M Yousef, S Chowdhury, K Abdilleh, M Knafl, ... Research Square, rs. 3. rs-3195257, 2023 | 2 | 2023 |
| Statistical design of a synthetic microbiome that clears a multi-drug resistant gut pathogen RA Oliveira, B Pandey, K Lee, M Yousef, RY Chen, C Triebold, ... bioRxiv, 2024.02. 28.582635, 2024 | 1 | 2024 |
| Early-life microbial intervention reduces colitis risk promoted by antibiotic-induced gut dysbiosis J Miyoshi, S Miyoshi, TO Delmont, C Cham, STM Lee, A Sakatani, K Yang, ... bioRxiv, 2020.03. 11.987412, 2020 | 1 | 2020 |
| Microbial signatures and therapeutic strategies in neurodegenerative diseases M Rob, M Yousef, AP Lakshmanan, A Mahboob, A Terranegra, A Chaari Biomedicine & Pharmacotherapy 184, 117905, 2025 | | 2025 |
