Jean Fred Fontaine

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Miguel AndradeJohannes-Gutenberg University in MainzDirección de correo verificada de uni-mainz.de
Martin SchaeferIEO MilanDirección de correo verificada de ieo.it
N MahFraunhofer Institut für Biomedizinische TechnikDirección de correo verificada de ibmt.fraunhofer.de
Adriano Barbosa-SilvaCo-founder & Senior Bioinformatics Scientist - ITTM S.A.Dirección de correo verificada de ittm-solutions.com
Ulf LeserKnowledge Management in Bioinformatics, Humboldt-Universität zu BerlinDirección de correo verificada de informatik.hu-berlin.de
Andreas KurtzChariteDirección de correo verificada de charite.de
Vinayagam ArunachalamHead of Computational and Systems Biology, ECD, TakedaDirección de correo verificada de takeda.com
Matthew R. HuskaRobert Koch InstituteDirección de correo verificada de rki.de
Jose Miguel OrtegaLaboratório de Biodados, Depto. de Bioquímica e Imunologia, ICB, UFMGDirección de correo verificada de icb.ufmg.br
wei chenProfessor of Systems Biology, Southern University of Science and TechnologyDirección de correo verificada de sustech.edu.cn
Francesca M SpagnoliGroup Leader, Center for Stem Cells and Regenerative Medicine, King's College London, UKDirección de correo verificada de kcl.ac.uk
Alexander DamaschunCharité - Universitätsmedizin Berlin, Berlin-Brandenburg Center for Regenerative TherapiesDirección de correo verificada de charite.de
Daniel GautheretProfessor at the Biology department, Université Paris-SaclayDirección de correo verificada de u-psud.fr
Matthieu LEGENDRECNRS Research associate, MarseilleDirección de correo verificada de igs.cnrs-mrs.fr
Reinhard SchneiderProf. Bioinformatics, University of Luxembourg, Head of Bioinformatics Core Facility, LuxembourgDirección de correo verificada de uni.lu
Francisco Manuel Ortuño GuzmánDepartment of Computer Engineering, Automatics and Robotics, University of GranadaDirección de correo verificada de ugr.es
Benoit BallesterINSERM - National Institute of Health and Medical ResearchDirección de correo verificada de inserm.fr

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Jean Fred Fontaine

Johannes Gutenberg University Mainz

Dirección de correo verificada de uni-mainz.de

Bioinformatics Computational Biology Machine Learning Text Mining Data Science


Título Ordenar por citas Ordenar por año Ordenar por título	Citado por Citado por	Año
HIPPIE: Integrating protein interaction networks with experiment based quality scores MH Schaefer, JF Fontaine, A Vinayagam, P Porras, EE Wanker, ... PloS one 7 (2), e31826, 2012	408	2012
Aversion to nicotine is regulated by the balanced activity of β4 and α5 nicotinic receptor subunits in the medial habenula S Frahm, MA Ślimak, L Ferrarese, J Santos-Torres, B Antolin-Fontes, ... Neuron 70 (3), 522-535, 2011	330	2011
The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text M Krallinger, M Vazquez, F Leitner, D Salgado, A Chatr-aryamontri, ... BMC bioinformatics 12 (8), S3, 2011	196	2011
MedlineRanker: flexible ranking of biomedical literature JF Fontaine, A Barbosa-Silva, M Schaefer, MR Huska, EM Muro, ... Nucleic acids research 37 (suppl_2), W141-W146, 2009	141	2009
CXCL5 limits macrophage foam cell formation in atherosclerosis A Rousselle, F Qadri, L Leukel, R Yilmaz, JF Fontaine, G Sihn, M Bader, ... The Journal of clinical investigation 123 (3), 1343-1347, 2013	134	2013
Adding protein context to the human protein-protein interaction network to reveal meaningful interactions MH Schaefer, TJS Lopes, N Mah, JE Shoemaker, Y Matsuoka, ... PLoS computational biology 9 (1), e1002860, 2013	107	2013
Génie: literature-based gene prioritization at multi genomic scale JF Fontaine, F Priller, A Barbosa-Silva, MA Andrade-Navarro Nucleic Acids Research 39 (suppl 2), W455, 2011	103	2011
Mutually exclusive signaling signatures define the hepatic and pancreatic progenitor cell lineage divergence E Rodríguez-Seguel, N Mah, H Naumann, IM Pongrac, N Cerdá-Esteban, ... Genes & development 27 (17), 1932-1946, 2013	95	2013
Interactome mapping provides a network of neurodegenerative disease proteins and uncovers widespread protein aggregation in affected brains C Haenig, N Atias, AK Taylor, A Mazza, MH Schaefer, J Russ, ... Cell reports 32 (7), 2020	91	2020
The ERPIN server: an interface to profile-based RNA motif identification A Lambert, JF Fontaine, M Legendre, F Leclerc, E Permal, F Major, ... Nucleic Acids Research 32 (suppl_2), W160-W165, 2004	74	2004
PESCADOR, a web-based tool to assist text-mining of biointeractions extracted from PubMed queries A Barbosa-Silva, JF Fontaine, ER Donnard, F Stussi, JM Ortega, ... BMC bioinformatics 12, 1-9, 2011	73	2011
Tissue-specific subnetworks and characteristics of publicly available human protein interaction databases TJS Lopes, M Schaefer, J Shoemaker, Y Matsuoka, J Fontaine, ... Bioinformatics 27 (17), 2414-2421, 2011	70	2011
Increasing the number of thyroid lesions classes in microarray analysis improves the relevance of diagnostic markers JF Fontaine, D Mirebeau-Prunier, M Raharijaona, B Franc, S Triau, ... PLoS One 4 (10), e7632, 2009	61	2009
Estrogen-related receptor alpha modulates lactate dehydrogenase activity in thyroid tumors D Mirebeau-Prunier, S Le Pennec, C Jacques, JF Fontaine, N Gueguen, ... PloS one 8 (3), e58683, 2013	59	2013
Death-associated protein 3 is overexpressed in human thyroid oncocytic tumours C Jacques, JF Fontaine, B Franc, D Mirebeau-Prunier, S Triau, ... British journal of cancer 101 (1), 132-138, 2009	58	2009
A roadmap of constitutive NF-κB activity in Hodgkin lymphoma: Dominant roles of p50 and p52 revealed by genome-wide analyses KAP de Oliveira, E Kaergel, M Heinig, JF Fontaine, G Patone, EM Muro, ... Genome medicine 8, 1-16, 2016	55	2016
Laitor-literature assistant for identification of terms co-occurrences and relationships A Barbosa-Silva, TG Soldatos, ILF Magalhães, GA Pavlopoulos, ... BMC bioinformatics 11, 1-10, 2010	48	2010
Batch effect detection and correction in RNA-seq data using machine-learning-based automated assessment of quality M Sprang, MA Andrade-Navarro, JF Fontaine BMC bioinformatics 23 (Suppl 6), 279, 2022	46	2022
DNA microarray and miRNA analyses reinforce the classification of follicular thyroid tumors C Jacques, D Guillotin, JF Fontaine, B Franc, D Mirebeau-Prunier, ... The Journal of Clinical Endocrinology & Metabolism 98 (5), E981-E989, 2013	44	2013
METHODS FOR THE PROGNOSIS OR FOR THE DIAGNOSIS OF A THYROID DISEASE R Houlgatte, F Nee, M Brigitte, J Fontaine, Y Malthiery, F Savagner EP Patent 2,132,329, 2009	44	2009

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