The piRNA targeting rules and the resistance to piRNA silencing in endogenous genes D Zhang, S Tu, M Stubna, WS Wu, WC Huang, Z Weng, HC Lee Science 359 (6375), 587-592, 2018 | 238 | 2018 |
A new measure of the robustness of biochemical networks BS Chen, YC Wang, WS Wu, WH Li Bioinformatics 21 (11), 2698-2705, 2005 | 103 | 2005 |
12 Computational Reconstruction of Transcriptional Regulatory Modules of the Yeast Cell Cycle WS Wu, WH Li, BS Chen Analysis of Microarray Data 12, 331, 2008 | 74 | 2008 |
Identifying gene regulatory modules of heat shock response in yeast WS Wu, WH Li BMC genomics 9, 1-15, 2008 | 63 | 2008 |
piRTarBase: a database of piRNA targeting sites and their roles in gene regulation WS Wu, JS Brown, TT Chen, YH Chu, WC Huang, S Tu, HC Lee Nucleic acids research 47 (D1), D181-D187, 2019 | 58 | 2019 |
Missing value imputation for microarray data: a comprehensive comparison study and a web tool CC Chiu, SY Chan, CC Wang, W WS BMC Systems Biology 7 (Suppl6), s12, 2013 | 58 | 2013 |
YPA: an integrated repository of promoter features in Saccharomyces cerevisiae DTH Chang, CY Huang, CY Wu, WS Wu Nucleic acids research 39 (suppl_1), D647-D652, 2010 | 58 | 2010 |
The spatial distribution of cis regulatory elements in yeast promoters and its implications for transcriptional regulation Z Lin, WS Wu, H Liang, Y Woo, WH Li BMC genomics 11, 1-11, 2010 | 55 | 2010 |
Systematic identification of yeast cell cycle transcription factors using multiple data sources WS Wu, WH Li BMC bioinformatics 9, 1-13, 2008 | 50 | 2008 |
pirScan: a webserver to predict piRNA targeting sites and to avoid transgene silencing in C. elegans WS Wu, WC Huang, JS Brown, D Zhang, X Song, H Chen, S Tu, Z Weng, ... Nucleic acids research 46 (W1), W43-W48, 2018 | 47 | 2018 |
Functional redundancy of transcription factors explains why most binding targets of a transcription factor are not affected when the transcription factor is knocked out WS Wu, FJ Lai BMC systems biology 9, 1-9, 2015 | 45 | 2015 |
Robust filtering circuit design for stochastic gene networks under intrinsic and extrinsic molecular noises BS Chen, WS Wu Mathematical Biosciences 211 (2), 342-355, 2008 | 40 | 2008 |
Identifying regulatory targets of cell cycle transcription factors using gene expression and ChIP-chip data WS Wu, WH Li, BS Chen BMC bioinformatics 8, 1-10, 2007 | 40 | 2007 |
Malignant transformation of oral potentially malignant disorders in Taiwan: An observational nationwide population database study SF Chiu, CH Ho, YC Chen, LW Wu, YL Chen, JH Wu, WS Wu, HK Hung, ... Medicine 100 (9), e24934, 2021 | 34 | 2021 |
Carcinogenesis of male oral submucous fibrosis alters salivary microbiomes MY Chen, JW Chen, LW Wu, KC Huang, JY Chen, WS Wu, WF Chiang, ... Journal of Dental Research 100 (4), 397-405, 2021 | 33 | 2021 |
CSmiRTar: condition-specific microRNA targets database WS Wu, BW Tu, TT Chen, SW Hou, JT Tseng PLoS One 12 (7), e0181231, 2017 | 25 | 2017 |
Identifying biologically interpretable transcription factor knockout targets by jointly analyzing the transcription factor knockout microarray and the ChIP-chip data TH Yang, WS Wu BMC Systems Biology 6, 1-11, 2012 | 25 | 2012 |
YTRP: a repository for yeast transcriptional regulatory pathways TH Yang, CC Wang, YC Wang, WS Wu Database 2014, bau014, 2014 | 23 | 2014 |
Underlying principles of natural selection in network evolution: systems biology approach BS Chen, WS Wu Evolutionary Bioinformatics 3, 117693430700300010, 2007 | 21 | 2007 |
Identifying stress transcription factors using gene expression and TF-gene association data WS Wu, BS Chen Bioinformatics and Biology Insights 1, BBI. S292, 2007 | 20 | 2007 |