دنبال کردن
Alexander Favorov
Alexander Favorov
research associate@oncbiostat.jhu.edu; senior fellow reasearcher@vigg.ru
ایمیل تأیید شده در sensi.org - صفحهٔ اصلی
عنوان
نقل شده توسط
نقل شده توسط
سال
A promoter-level mammalian expression atlas‏
Nature 507 (7493), 462-470, 2014‏
18092014
Assessing computational tools for the discovery of transcription factor binding sites‏
M Tompa, N Li, TL Bailey, GM Church, B De Moor, E Eskin, AV Favorov, ...‏
Nature biotechnology 23 (1), 137-144, 2005‏
16322005
Inferring causal molecular networks: empirical assessment through a community-based effort‏
SM Hill, LM Heiser, T Cokelaer, M Unger, NK Nesser, DE Carlin, Y Zhang, ...‏
Nature methods 13 (4), 310-318, 2016‏
2632016
Enter the matrix: factorization uncovers knowledge from omics‏
GL Stein-O’Brien, R Arora, AC Culhane, AV Favorov, LX Garmire, ...‏
Trends in Genetics 34 (10), 790-805, 2018‏
2482018
A Markov chain Monte Carlo technique for identification of combinations of allelic variants underlying complex diseases in humans‏
AV Favorov, TV Andreewski, MA Sudomoina, OO Favorova, G Parmigiani, ...‏
Genetics 171 (4), 2113-2121, 2005‏
2072005
Exploring massive, genome scale datasets with the GenometriCorr package‏
A Favorov, L Mularoni, LM Cope, Y Medvedeva, AA Mironov, VJ Makeev, ...‏
PLoS computational biology 8 (5), e1002529, 2012‏
2032012
A Gibbs sampler for identification of symmetrically structured, spaced DNA motifs with improved estimation of the signal length‏
AV Favorov, MS Gelfand, AV Gerasimova, DA Ravcheev, AA Mironov, ...‏
Bioinformatics 21 (10), 2240-2245, 2005‏
1892005
Deep and wide digging for binding motifs in ChIP-Seq data‏
IV Kulakovskiy, VA Boeva, AV Favorov, VJ Makeev‏
Bioinformatics 26 (20), 2622-2623, 2010‏
1882010
Functional annotation of human long noncoding RNAs via molecular phenotyping‏
JA Ramilowski, CW Yip, S Agrawal, JC Chang, Y Ciani, IV Kulakovskiy, ...‏
Genome research 30 (7), 1060-1072, 2020‏
1572020
Differential roles of epigenetic changes and Foxp3 expression in regulatory T cell-specific transcriptional regulation‏
H Morikawa, N Ohkura, A Vandenbon, M Itoh, S Nagao-Sato, H Kawaji, ...‏
Proceedings of the National Academy of Sciences 111 (14), 5289-5294, 2014‏
1532014
A polygenic approach to the study of polygenic diseases‏
D Lvovs, OO Favorova, AV Favorov‏
Acta Naturae (англоязычная версия) 4 (3 (14)), 59-71, 2012‏
1502012
Epigenetic regulation of gene expression in cancer: techniques, resources and analysis‏
LT Kagohara, GL Stein-O’Brien, D Kelley, E Flam, HC Wick, LV Danilova, ...‏
Briefings in functional genomics 17 (1), 49-63, 2018‏
1422018
A review of genome-wide association studies for multiple sclerosis: classical and hypothesis-driven approaches‏
VV Bashinskaya, OG Kulakova, AN Boyko, AV Favorov, OO Favorova‏
Human genetics 134, 1143-1162, 2015‏
1332015
Preserving biological heterogeneity with a permuted surrogate variable analysis for genomics batch correction‏
HS Parker, JT Leek, AV Favorov, M Considine, X Xia, S Chavan, ...‏
Bioinformatics 30 (19), 2757-2763, 2014‏
1252014
CoGAPS: an R/C++ package to identify patterns and biological process activity in transcriptomic data‏
EJ Fertig, J Ding, AV Favorov, G Parmigiani, MF Ochs‏
Bioinformatics 26 (21), 2792-2793, 2010‏
1092010
HPV E2, E4, E5 drive alternative carcinogenic pathways in HPV positive cancers‏
S Ren, DA Gaykalova, T Guo, AV Favorov, EJ Fertig, P Tamayo, ...‏
Oncogene 39 (40), 6327-6339, 2020‏
912020
Landscape of allele-specific transcription factor binding in the human genome‏
S Abramov, A Boytsov, D Bykova, DD Penzar, I Yevshin, SK Kolmykov, ...‏
Nature communications 12 (1), 2751, 2021‏
892021
Chromatin dysregulation and DNA methylation at transcription start sites associated with transcriptional repression in cancers‏
M Ando, Y Saito, G Xu, NQ Bui, K Medetgul-Ernar, M Pu, K Fisch, S Ren, ...‏
Nature communications 10 (1), 2188, 2019‏
892019
Transcriptional mechanisms of resistance to anti–PD-1 therapy‏
ML Ascierto, A Makohon-Moore, EJ Lipson, JM Taube, TL McMiller, ...‏
Clinical cancer research 23 (12), 3168-3180, 2017‏
812017
RNAKinetics: a web server that models secondary structure kinetics of an elongating RNA‏
LV Danilova, DD Pervouchine, AV Favorov, AA Mironov‏
Journal of bioinformatics and computational biology 4 (02), 589-596, 2006‏
782006
سیستم در حال حاضر قادر به انجام عملکرد نیست. بعداً دوباره امتحان کنید.
مقاله‌ها 1–20