دنبال کردن
Julio Augusto Freyre-González (orcid.org/0000-0001-7061-7637)
Julio Augusto Freyre-González (orcid.org/0000-0001-7061-7637)
Head of the Regulatory Systems Biology Research Group, Center for Genomic Sciences, UNAM, Mexico
ایمیل تأیید شده در ccg.unam.mx - صفحهٔ اصلی
عنوان
نقل شده توسط
نقل شده توسط
سال
Modular analysis of the transcriptional regulatory network of< i> E. coli</i>‏
O Resendis-Antonio, JA Freyre-González, R Menchaca-Méndez, ...‏
TRENDS in Genetics 21 (1), 16-20, 2005‏
1302005
Identification of regulatory network topological units coordinating the genome-wide transcriptional response to glucose in Escherichia coli‏
RM Gutierrez-Ríos, JA Freyre-Gonzalez, O Resendis, J Collado-Vides, ...‏
BMC microbiology 7 (1), 53, 2007‏
872007
Functional architecture of Escherichia coli: new insights provided by a natural decomposition approach‏
JA Freyre-González, JA Alonso-Pavón, LG Treviño-Quintanilla, ...‏
Genome biology 9 (10), R154, 2008‏
522008
Calcitriol increases Dicer expression and modifies the microRNAs signature in SiHa cervical cancer cells‏
RJ González-Duarte, V Cázares-Ordoñez, S Romero-Córdoba, L Díaz, ...‏
Biochemistry and Cell Biology 93 (4), 376-384, 2015‏
412015
Anti-sigma factors in E. coli: common regulatory mechanisms controlling sigma factors availability‏
L Gerardo Treviño-Quintanilla, J Augusto Freyre-González, ...‏
Current genomics 14 (6), 378-387, 2013‏
402013
Lessons from the modular organization of the transcriptional regulatory network of Bacillus subtilis‏
JA Freyre-González, AM Manjarrez-Casas, E Merino, M Martinez-Nuñez, ...‏
BMC Systems Biology 7 (1), 127, 2013‏
352013
Abasy Atlas: a comprehensive inventory of systems, global network properties and systems-level elements across bacteria‏
MA Ibarra-Arellano, AI Campos-González, LG Treviño-Quintanilla, ...‏
Database 2016, baw089, 2016‏
222016
Analyzing Regulatory Networks in Bacteria‏
JA Freyre-Gonzalez, LG Trevino-Quintanilla‏
Nature Education 3 (9), 24, 2010‏
222010
Abasy Atlas v2.2: The most comprehensive and up-to-date inventory of meta-curated, historical, bacterial regulatory networks, their completeness and system-level characterization‏
JM Escorcia-Rodríguez, A Tauch, JA Freyre-González‏
Computational and Structural Biotechnology Journal 18, 1228-1237, 2020‏
212020
Prokaryotic regulatory systems biology: Common principles governing the functional architectures of Bacillus subtilis and Escherichia coli unveiled by the natural decomposition …‏
JA Freyre-González, LG Treviño-Quintanilla, IA Valtierra-Gutiérrez, ...‏
Journal of biotechnology 161 (3), 278-286, 2012‏
212012
Functional architecture and global properties of the Corynebacterium glutamicum regulatory network: Novel insights from a dataset with a high genomic coverage‏
JA Freyre-Gonzalez, A Tauch‏
Journal of Biotechnology 257, 199-210, 2017‏
172017
Improving gene regulatory network inference and assessment: The importance of using network structure‏
JM Escorcia-Rodríguez, E Gaytan-Nuñez, EM Hernandez-Benitez, ...‏
Frontiers in Genetics 14, 1143382, 2023‏
162023
Curation, inference, and assessment of a globally reconstructed gene regulatory network for Streptomyces coelicolor‏
A Zorro-Aranda, JM Escorcia-Rodríguez, JK González-Kise, ...‏
Scientific Reports 12 (1), 2840, 2022‏
132022
Identification of network topological units coordinating the global expression response to glucose in Bacillus subtilis and its comparison to Escherichia coli‏
CD Vázquez, JA Freyre-González, G Gosset, JA Loza, RM Gutiérrez-Ríos‏
BMC microbiology 9 (1), 176, 2009‏
122009
Evolutionary constraints on the complexity of genetic regulatory networks allow predictions of the total number of genetic interactions‏
AI Campos, JA Freyre-González‏
Scientific Reports 9 (1), 3618, 2019‏
102019
Corynebacterium glutamicum Regulation beyond Transcription: Organizing Principles and Reconstruction of an Extended Regulatory Network Incorporating Regulations Mediated by …‏
JM Escorcia-Rodríguez, A Tauch, JA Freyre-González‏
Microorganisms 9 (7), 1395, 2021‏
82021
Non-synonymous to synonymous substitutions suggest that orthologs tend to keep their functions, while paralogs are a source of functional novelty‏
GMH JM Escorcia-Rodríguez, M Esposito, JA Freyre-Gonzalez‏
PeerJ 10, e13843, 2022‏
72022
System principles governing the organization, architecture, dynamics, and evolution of gene regulatory networks‏
JA Freyre-González, JM Escorcia-Rodríguez, LF Gutiérrez-Mondragón, ...‏
Frontiers in Bioengineering and Biotechnology 10, 888732, 2022‏
62022
Molecular characterization of chloranilic acid degradation in Pseudomonas putida TQ07‏
LG Treviño-Quintanilla, JA Freyre-González, RA Guillén-Garcés, C Olvera‏
The Journal of Microbiology 49 (6), 974-980, 2011‏
42011
Rhizobium etli CFN42 proteomes showed isoenzymes in free-living and symbiosis with a different transcriptional regulation inferred from a transcriptional regulatory network‏
H Taboada-Castro, J Gil, L Gómez-Caudillo, JM Escorcia-Rodríguez, ...‏
Frontiers in Microbiology 13, 947678, 2022‏
32022
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مقاله‌ها 1–20