| vcf2phylip v2. 0: convert a VCF matrix into several matrix formats for phylogenetic analysis EM Ortiz | 258 | 2019 |
| Conflicting phylogenomic signals reveal a pattern of reticulate evolution in a recent high‐Andean diversification (Asteraceae: Astereae: Diplostephium) OM Vargas, EM Ortiz, BB Simpson New Phytologist 214 (4), 1736-1750, 2017 | 213 | 2017 |
| Incongruence between gene trees and species trees and phylogenetic signal variation in plastid genes DJP Goncalves, BB Simpson, EM Ortiz, GH Shimizu, RK Jansen Molecular phylogenetics and evolution 138, 219-232, 2019 | 146 | 2019 |
| Phylogenomics and the rise of the angiosperms AR Zuntini, T Carruthers, O Maurin, PC Bailey, K Leempoel, GE Brewer, ... Nature 629 (8013), 843-850, 2024 | 112 | 2024 |
| Isolation by instability: Historical climate change shapes population structure and genomic divergence of treefrogs in the Neotropical Cerrado savanna MM Vasconcellos, GR Colli, JN Weber, EM Ortiz, MT Rodrigues, ... Molecular Ecology 28 (7), 1748-1764, 2019 | 50 | 2019 |
| A RAD-sequencing approach to genome-wide marker discovery, genotyping, and phylogenetic inference in a diverse radiation of primates LM Valencia, A Martins, EM Ortiz, A Di Fiore PloS one 13 (8), e0201254, 2018 | 38 | 2018 |
| Enhancing photosynthesis at high light levels by adaptive laboratory evolution M Dann, EM Ortiz, M Thomas, A Guljamow, M Lehmann, H Schaefer, ... Nature Plants 7 (5), 681-695, 2021 | 37 | 2021 |
| Historical biogeography of Vochysiaceae reveals an unexpected perspective of plant evolution in the Neotropics DJP Gonçalves, GH Shimizu, EM Ortiz, RK Jansen, BB Simpson American Journal of Botany 107 (7), 1004-1020, 2020 | 22 | 2020 |
| Biogeography and integrative taxonomy of Epipterygium (Mniaceae, Bryophyta) M Hanusch, EM Ortiz, J Patiño, H Schaefer Taxon 69 (6), 1150-1171, 2020 | 20 | 2020 |
| Geographic patterns of genomic diversity and structure in the C4 grass Panicum hallii across its natural distribution JD Palacio-Mejía, PP Grabowski, EM Ortiz, GA Silva-Arias, T Haque, ... AoB plants 13 (2), plab002, 2021 | 18 | 2021 |
| Transcriptomic data reveals nuclear-mitochondrial discordance in Gomphocerinae grasshoppers (Insecta: Orthoptera: Acrididae) O Hawlitschek, EM Ortiz, S Noori, KC Webster, M Husemann, RJ Pereira Molecular Phylogenetics and Evolution 170, 107439, 2022 | 16 | 2022 |
| vcf2phylip v2. 0: convert a VCF matrix into several matrix formats for phylogenetic analysis. Zenodo. 2019 EM Ortiz | 11 | 2023 |
| Notes on and lectotypification of Augusto Weberbauer s collections of Peruvian Ericaceae JL Lutey, EM Ortiz, B León Revista Peruana de Biología 15 (1), 127-134, 2008 | 10 | 2008 |
| A novel phylogenomics pipeline reveals complex pattern of reticulate evolution in Cucurbitales EM Ortiz, A Höwener, G Shigita, M Raza, O Maurin, A Zuntini, F Forest, ... BioRxiv, 2023.10. 27.564367, 2023 | 9 | 2023 |
| Genome assembly and phylogenomic data analyses using plastid data: Contrasting species tree estimation methods DJP Gonçalves, BB Simpson, GH Shimizu, RK Jansen, EM Ortiz Data in brief 25, 104271, 2019 | 9 | 2019 |
| DNA extraction from old herbarium material of Veronica subgen. Pseudolysimachium (Plantaginaceae) J Hopke, G Brewer, S Dodsworth, EM Ortiz, DC Albach Ukrainian Botanical Journal 75 (6), 564-575, 2019 | 8 | 2019 |
| Resolving the phylogeny of Thladiantha (Cucurbitaceae) with three different target capture pipelines M Raza, EM Ortiz, L Schwung, G Shigita, H Schaefer BMC Ecology and Evolution 23 (1), 75, 2023 | 4 | 2023 |
| paralog-finder: a script to detect and blacklist paralog RAD loci (1.0) EM Ortiz Zenodo: doi 10, 2018 | 4 | 2018 |
| Revision of Siphonandra (Ericaceae: Vaccinieae), a genus endemic to Peru and Bolivia JL Luteyn, EM Ortiz Journal of the Botanical Research Institute of Texas, 249-261, 2008 | 4 | 2008 |
| Herbarium Areqvipense (HUSA): informatización y representatividad de su colección IF Treviño, DA Sotomayor, MA Cueva, R Perez, L Cáceres, D Ramos, ... Revista peruana de biología 19 (2), 219-222, 2012 | 3 | 2012 |
Beryl B SimpsonProfessor of Integrative Biologyایمیل تأیید شده در austin.utexas.edu