دنبال کردن
Maxime Borry
عنوان
نقل شده توسط
نقل شده توسط
سال
Reconstruction of ancient microbial genomes from the human gut‏
MC Wibowo, Z Yang, M Borry, A Hübner, KD Huang, BT Tierney, ...‏
Nature 594 (7862), 234-239, 2021‏
2182021
Reproducible, portable, and efficient ancient genome reconstruction with nf-core/eager‏
JAF Yates, TC Lamnidis, M Borry, AA Valtueña, Z Fagernäs, S Clayton, ...‏
PeerJ 9, e10947, 2021‏
100*2021
CoproID predicts the source of coprolites and paleofeces using microbiome composition and host DNA content‏
M Borry, B Cordova, A Perri, M Wibowo, TP Honap, J Ko, J Yu, K Britton, ...‏
PeerJ 8, e9001, 2020‏
492020
Community-curated and standardised metadata of published ancient metagenomic samples with AncientMetagenomeDir‏
JA Fellows Yates, A Andrades Valtueña, ÅJ Vågene, B Cribdon, ...‏
Scientific Data 8 (1), 31, 2021‏
382021
Natural products from reconstructed bacterial genomes of the Middle and Upper Paleolithic‏
M Klapper, A Hübner, A Ibrahim, I Wasmuth, M Borry, VG Haensch, ...‏
Science 380 (6645), 619-624, 2023‏
362023
PyDamage: automated ancient damage identification and estimation for contigs in ancient DNA de novo assembly‏
M Borry, A Hübner, AB Rohrlach, C Warinner‏
PeerJ 9, e11845, 2021‏
342021
Sourcepredict: Prediction of metagenomic sample sources using dimension reduction followed by machine learning classification‏
M Borry‏
Journal of Open Source Software 4, 1540, 2019‏
102019
Community-curated and standardised metadata of published ancient metagenomic samples with AncientMetagenomeDir. Sci Data 8: 31‏
JA Fellows Yates, A Andrades Valtueña, ÅJ Vågene, B Cribdon, ...‏
82021
CoproID predicts the source of coprolites and paleofeces using microbiome composition and host DNA content. PeerJ 8: e9001‏
M Borry, B Cordova, A Perri, M Wibowo, TP Honap, J Ko, J Yu, K Britton, ...‏
82020
PyDamage: automated ancient damage identification and estimation for contigs in ancient DNA de novo assembly. PeerJ 9: e11845‏
M Borry, A Hübner, AB Rohrlach, C Warinner‏
62021
Facilitating accessible, rapid, and appropriate processing of ancient metagenomic data with AMDirT‏
M Borry, A Forsythe, AA Valtueña, A Hübner, A Ibrahim, A Quagliariello, ...‏
F1000Research 12, 926, 2024‏
42024
nf-core/taxprofiler: Highly parallelised and flexible pipeline for metagenomic taxonomic classification and profiling‏
S Stamouli, ME Beber, T Normark, TA Christensen, L Andersson-Li, ...‏
bioRxiv, 2023.10. 20.563221, 2023‏
32023
Taxpasta: Taxonomic profile aggregation and standardisation‏
ME Beber, M Borry, S Stamouli, JA Fellows Yates‏
The Journal of Open Source Software (JOSS) 8 (87), 2023‏
32023
sam2lca: Lowest Common Ancestor for SAM/BAM/CRAM alignment files‏
M Borry, A Hübner, C Warinner‏
Journal of Open Source Software 7 (74), 4360, 2022‏
22022
Introduction to ancient metagenomics (2024.2)‏
JA Fellows Yates, C Warinner, A Andrades Valtueña, M Borry, M Guellil, ...‏
Zenodo, 2024‏
2024
Expanding the ancient DNA bioinformatics toolbox, and its applications to archeological microbiomes‏
M Borry‏
2023
Foldit, un jeu pour faire de la recherche‏
F BERNARDON, M BORRY, M POTHIER‏
La Recherche (Imprimé), 68-71, 2012‏
2012
Facilitating accessible, rapid, and appropriate processing o f ancient metagenomic data with AMDirT [version 1; peer‏
M Borry, A Forsythe, AA Valtueña, A Hübner, A Ibrahim, A Quagliariello, ...‏
سیستم در حال حاضر قادر به انجام عملکرد نیست. بعداً دوباره امتحان کنید.
مقاله‌ها 1–18