دنبال کردن
John Ingraham
John Ingraham
Generate Biomedicines, Inc
ایمیل تأیید شده در csail.mit.edu - صفحهٔ اصلی
عنوان
نقل شده توسط
نقل شده توسط
سال
Mutation effects predicted from sequence co-variation‏
TA Hopf, JB Ingraham, FJ Poelwijk, CPI Schärfe, M Springer, C Sander, ...‏
Nature Biotechnology 35 (2), 128-135, 2017‏
7252017
Deep generative models of genetic variation capture the effects of mutations‏
AJ Riesselman, JB Ingraham, DS Marks‏
Nature Methods 15, 816-822, 2018‏
6622018
Generative Models for Graph-Based Protein Design‏
J Ingraham, VK Garg, R Barzilay, T Jaakkola‏
Neural Information Processing Systems, 2019‏
5802019
Illuminating protein space with a programmable generative model‏
JB Ingraham, M Baranov, Z Costello, KW Barber, W Wang, A Ismail, ...‏
Nature 623 (7989), 1070-1078, 2023‏
3502023
Defining variant-resistant epitopes targeted by SARS-CoV-2 antibodies: A global consortium study‏
KM Hastie, H Li, D Bedinger, SL Schendel, SM Dennison, K Li, ...‏
Science 374 (6566), 472-478, 2021‏
3082021
Basketball teams as strategic networks‏
JH Fewell, D Armbruster, J Ingraham, A Petersen, JS Waters‏
PloS one 7 (11), e47445, 2012‏
2692012
The EVcouplings Python framework for coevolutionary sequence analysis‏
TA Hopf, AG Green, B Schubert, S Mersmann, CPI Schärfe, JB Ingraham, ...‏
Bioinformatics 35 (9), 1582-1584, 2019‏
2502019
3D RNA and Functional Interactions from Evolutionary Couplings‏
C Weinreb, AJ Riesselman, JB Ingraham, T Gross, C Sander, DS Marks‏
Cell 165 (4), 963-975, 2016‏
1982016
Learning Protein Structure with a Differentiable Simulator‏
J Ingraham, A Riesselman, C Sander, D Marks‏
International Conference on Learning Representations, 2019‏
1722019
Structured States of Disordered Proteins from Genomic Sequences‏
A Toth-Petroczy, P Palmedo, J Ingraham, TA Hopf, B Berger, C Sander, ...‏
Cell 167 (1), 158-170. e12, 2016‏
1522016
Galactose metabolic genes in yeast respond to a ratio of galactose and glucose‏
R Escalante-Chong, Y Savir, SM Carroll, JB Ingraham, J Wang, CJ Marx, ...‏
Proceedings of the National Academy of Sciences 112 (5), 1636-1641, 2015‏
1452015
Cellbox: Interpretable machine learning for perturbation biology with application to the design of cancer combination therapy‏
B Yuan, C Shen, A Luna, A Korkut, DS Marks, J Ingraham, C Sander‏
Cell systems 12 (2), 128-140. e4, 2021‏
1252021
Generating transition states of isomerization reactions with deep learning‏
L Pattanaik, JB Ingraham, CA Grambow, WH Green‏
Physical Chemistry Chemical Physics 22 (41), 23618-23626, 2020‏
612020
Variational Inference for Sparse and Undirected Models‏
J Ingraham, D Marks‏
International Conference on Machine Learning, 2017‏
46*2017
Simultaneous enhancement of multiple functional properties using evolution-informed protein design‏
B Fram, Y Su, I Truebridge, AJ Riesselman, JB Ingraham, A Passera, ...‏
Nature Communications 15 (1), 5141, 2024‏
112024
Antigen Binding Molecules Targeting SARS-CoV-2‏
G Grigoryan, J Ingraham, CL Leung, RS Federman, RJ Green, V Xue, ...‏
US Patent App. 18/151,088, 2023‏
32023
Antigen binding molecules targeting SARS-CoV-2‏
G Grigoryan, J Ingraham‏
US Patent 11,987,616, 2024‏
22024
Probabilistic Models of Structure in Biological Sequences‏
JB Ingraham‏
PQDT-Global, 2018‏
22018
Antigen binding molecules targeting SARS-CoV-2‏
G Grigoryan, J Ingraham, CL Leung, RS Federman, RJ Green, AH Ramos, ...‏
US Patent 11,981,725, 2024‏
2024
Antigen binding molecules targeting sars-cov-2‏
G GRIGORYAN, J Ingraham, CL Leung, RS FEDERMAN, RJ GREEN, ...‏
2022
سیستم در حال حاضر قادر به انجام عملکرد نیست. بعداً دوباره امتحان کنید.
مقاله‌ها 1–20