| Multi‐Omics Factor Analysis—a framework for unsupervised integration of multi‐omics data sets R Argelaguet*, B Velten*, D Arnol, S Dietrich, T Zenz, JC Marioni, ... Molecular systems biology 14 (6), 2018 | 1030 | 2018 |
| Gene expression across mammalian organ development M Cardoso-Moreira, J Halbert, D Valloton, B Velten, C Chen, Y Shao, ... Nature 571 (7766), 505-509, 2019 | 665 | 2019 |
| MOFA+: a statistical framework for comprehensive integration of multi-modal single-cell data R Argelaguet*, D Arnol*, D Bredikhin, Y Deloro, B Velten, JC Marioni, ... Genome Biology 21 (1), 1-17, 2020 | 621 | 2020 |
| Drug-perturbation-based stratification of blood cancer S Dietrich*, M Oleś*, J Lu*, L Sellner, S Anders, B Velten, B Wu, J Hüllein, ... The Journal of clinical investigation 128 (1), 427-445, 2018 | 162 | 2018 |
| Spatial multiomics map of trophoblast development in early pregnancy A Arutyunyan, K Roberts, K Troulé, FCK Wong, MA Sheridan, I Kats, ... Nature 616 (7955), 143-151, 2023 | 137 | 2023 |
| Identifying temporal and spatial patterns of variation from multimodal data using MEFISTO B Velten, JM Braunger, R Argelaguet, D Arnol, J Wirbel, D Bredikhin, ... Nature methods 19 (2), 179-186, 2022 | 134 | 2022 |
| Mechanistic insights into transcription factor cooperativity and its impact on protein-phenotype interactions IL Ibarra, NM Hollmann, B Klaus, S Augsten, B Velten, J Hennig, ... Nature communications 11 (1), 124, 2020 | 83 | 2020 |
| Developmental gene expression differences between humans and mammalian models M Cardoso-Moreira, I Sarropoulos, B Velten, M Mort, DN Cooper, ... Cell reports 33 (4), 2020 | 67 | 2020 |
| Principles and challenges of modeling temporal and spatial omics data B Velten, O Stegle Nature Methods 20 (10), 1462-1474, 2023 | 37 | 2023 |
| Multicellular factor analysis of single-cell data for a tissue-centric understanding of disease ROR Flores, JD Lanzer, D Dimitrov, B Velten, J Saez-Rodriguez Elife 12, e93161, 2023 | 26 | 2023 |
| Survey of ex vivo drug combination effects in chronic lymphocytic leukemia reveals synergistic drug effects and genetic dependencies M Lukas*, B Velten*, L Sellner, K Tomska, J Hüellein, T Walther, ... Leukemia, 1-17, 2020 | 23 | 2020 |
| Adaptive penalization in high-dimensional regression and classification with external covariates using variational Bayes B Velten, W Huber Biostatistics, kxz034, 2019 | 20 | 2019 |
| FISHFactor: a probabilistic factor model for spatial transcriptomics data with subcellular resolution FC Walter, O Stegle, B Velten Bioinformatics 39 (5), btad183, 2023 | 17 | 2023 |
| In situ analysis of osmolyte mechanisms of proteome thermal stabilization M Pepelnjak, B Velten, N Näpflin, T von Rosen, UC Palmiero, JH Ko, ... Nature Chemical Biology 20 (8), 1053-1065, 2024 | 11 | 2024 |
| Meta-Research: The changing career paths of PhDs and postdocs trained at EMBL J Lu, B Velten, B Klaus, M Ramm, W Huber, R Coulthard-Graf Elife 12, e78706, 2023 | 6* | 2023 |
| Image-based Parameter Inference for Spatio-temporal models of Organogenesis B Velten, E Uenal, D Iber arXiv preprint arXiv:1406.2573, 2014 | 2 | 2014 |
| Guide assignment in single-cell CRISPR screens using crispat JM Braunger, B Velten Bioinformatics 40 (9), btae535, 2024 | 1 | 2024 |
| A genome-scale single cell CRISPRi map of trans gene regulation across human pluripotent stem cell lines C Feng, EM Peets, Y Zhou, L Crepaldi, S Usluer, A Dunham, JM Braunger, ... bioRxiv, 2024.11. 28.625833, 2024 | | 2024 |
| Multivariate Methods for Heterogeneous High-Dimensional Data in Genome Biology B Velten ETH Zurich, 2019 | | 2019 |
| Cellij: A Modular Factor Model Framework for Interpretable and Accelerated Multi-Omics Data Integration M Rohbeck, A Qoku, T Treis, FJ Theis, B Velten, F Buettner, O Stegle | | |
Oliver StegleGerman Cancer Research Center (DKFZ) & EMBL Heidelbergایمیل تأیید شده در dkfz.de
