| Glucose metabolism regulates T cell activation, differentiation, and functions CS Palmer, M Ostrowski, B Balderson, N Christian, SM Crowe Frontiers in immunology 6, 128852, 2015 | 481 | 2015 |
| Robust mapping of spatiotemporal trajectories and cell–cell interactions in healthy and diseased tissues D Pham, X Tan, B Balderson, J Xu, LF Grice, S Yoon, EF Willis, M Tran, ... Nature communications 14 (1), 7739, 2023 | 417* | 2023 |
| Emerging role and characterization of immunometabolism: relevance to HIV pathogenesis, serious non-AIDS events, and a cure CS Palmer, DC Henstridge, D Yu, A Singh, B Balderson, G Duette, ... The Journal of Immunology 196 (11), 4437-4444, 2016 | 57 | 2016 |
| Conserved epigenetic regulatory logic infers genes governing cell identity WJ Shim, E Sinniah, J Xu, B Vitrinel, M Alexanian, G Andreoletti, S Shen, ... Cell Systems 11 (6), 625-639. e13, 2020 | 45 | 2020 |
| ChIP-R: Assembling reproducible sets of ChIP-seq and ATAC-seq peaks from multiple replicates R Newell, R Pienaar, B Balderson, M Piper, A Essebier, M Bodén Genomics 113 (4), 1855-1866, 2021 | 33 | 2021 |
| Engineering indel and substitution variants of diverse and ancient enzymes using Graphical Representation of Ancestral Sequence Predictions (GRASP) G Foley, A Mora, CM Ross, S Bottoms, L Sützl, ML Lamprecht, J Zaugg, ... PLOS Computational Biology 18 (10), e1010633, 2022 | 32 | 2022 |
| Identifying and engineering ancient variants of enzymes using Graphical Representation of Ancestral Sequence Predictions (GRASP) G Foley, A Mora, CM Ross, S Bottoms, L Sützl, ML Lamprecht, J Zaugg, ... BioRxiv, 2019.12. 30.891457, 2020 | 15 | 2020 |
| Spatial transcriptomic analysis of Sonic hedgehog medulloblastoma identifies that the loss of heterogeneity and promotion of differentiation underlies the response to CDK4/6 … T Vo, B Balderson, K Jones, G Ni, J Crawford, A Millar, E Tolson, ... Genome Medicine 15 (1), 29, 2023 | 13 | 2023 |
| Glucose metabolism regulates T cell activation, differentiation, and functions. Front Immunol. 2015; 6: 1 CS Palmer, M Ostrowski, B Balderson, N Christian, SM Crowe | 10 | 2015 |
| Selective requirement for polycomb repressor complex 2 in the generation of specific hypothalamic neuronal subtypes B Yaghmaeian Salmani, B Balderson, S Bauer, H Ekman, A Starkenberg, ... Development 149 (5), dev200076, 2022 | 7 | 2022 |
| Integrating Single‐Cell and Spatial Transcriptomics Reveals Heterogeneity of Early Pig Skin Development and a Subpopulation with Hair Placode Formation Y Wang, Y Jiang, G Ni, S Li, B Balderson, Q Zou, H Liu, Y Jiang, J Sun, ... Advanced Science, 2306703, 2024 | 5 | 2024 |
| Cytocipher determines significantly different populations of cells in single-cell RNA-seq data B Balderson, M Piper, S Thor, M Boden Bioinformatics 39 (7), btad435, 2023 | 3 | 2023 |
| Comparative analysis of diverse cell states establishes an epigenetic basis for inferring regulatory genes governing cell identity WJ Shim, E Sinniah, J Xu, B Vitrinel, M Alexanian, G Andreoletti, S Shen, ... bioRxiv, 635516, 2019 | 2 | 2019 |
| SiRCle (Signature Regulatory Clustering) model integration reveals mechanisms of phenotype regulation in renal cancer A Mora, C Schmidt, B Balderson, C Frezza, M Bodén Genome Medicine 16 (1), 1-26, 2024 | 1 | 2024 |
| Joint single-cell profiling of CRISPR-Cas9 edits and transcriptomes reveals widespread off-target events and their effects on gene expression MH Lorenzini, B Balderson, K Sajeev, AJ Ho, G McVicker bioRxiv, 2025.02. 07.636966, 2025 | | 2025 |
| Integrating Single‐Cell and Spatial Transcriptomics Reveals Heterogeneity of Early Pig Skin Development and a Subpopulation with Hair Placode Formation (Adv. Sci. 20/2024) Y Wang, Y Jiang, G Ni, S Li, B Balderson, Q Zou, H Liu, Y Jiang, J Sun, ... Advanced Science 11 (20), 2470117, 2024 | | 2024 |
| Systematic analysis of the transcriptional landscape of melanoma reveals drug-target expression plasticity B Balderson, M Fane, TJ Harvey, M Piper, A Smith, M Bodén Briefings in Functional Genomics, elad055, 2024 | | 2024 |
| Cell Type Definition from Single Cell RNA-seq B Balderson | | 2023 |
| i-stLearn: An interactive platform for spatial transcriptomics analysis D Pham, B Balderson, QH Nguyen bioRxiv, 2023.03. 27.534291, 2023 | | 2023 |
| SPATIAL TRANSCRIPTOMIC ANALYSIS OF SONIC HEDGEHOG MEDULLOBLASTOMA IDENTIFIES THAT LOSS OF HETEROGENEITY AND INDUCED DIFFERENTIATION UNDERLIES THE RESPONSE TO CDK4/6 INHIBITION T Vo, B Balderson, K Jones, J Crawford, A Millar, E Tolson, M Ruitenberg, ... NEURO-ONCOLOGY 24, 105-105, 2022 | | 2022 |