دنبال کردن
Anshul Kundaje
Anshul Kundaje
Associate Professor, Dept. of Genetics, Dept. of Computer Science, Stanford University
ایمیل تأیید شده در stanford.edu - صفحهٔ اصلی
عنوان
نقل شده توسط
نقل شده توسط
سال
An integrated encyclopedia of DNA elements in the human genome‏
EP Consortium‏
Nature 489 (7414), 57–74, 2012‏
175312012
Integrative analysis of 111 reference human epigenomes‏
Roadmap Epigenomics Consortium Integrative analysis coordination Kundaje ...‏
Nature 518 (7539), 317-330, 2015‏
6383*2015
Learning important features through propagating activation differences‏
A Shrikumar, P Greenside, A Kundaje‏
International conference on machine learning, 3145-3153, 2017‏
5624*2017
ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia‏
SG Landt, GK Marinov, A Kundaje, P Kheradpour, F Pauli, S Batzoglou, ...‏
Genome research 22 (9), 1813-1831, 2012‏
23412012
Opportunities and obstacles for deep learning in biology and medicine‏
T Ching, DS Himmelstein, BK Beaulieu-Jones, AA Kalinin, BT Do, ...‏
Journal of the royal society interface 15 (141), 20170387, 2018‏
22992018
An improved ATAC-seq protocol reduces background and enables interrogation of frozen tissues‏
MR Corces, AE Trevino, EG Hamilton, PG Greenside, ...‏
Nature methods 14 (10), 959-962, 2017‏
21182017
A comparative encyclopedia of DNA elements in the mouse genome‏
F Yue, Y Cheng, A Breschi, J Vierstra, W Wu, T Ryba, R Sandstrom, Z Ma, ...‏
Nature 515 (7527), 355-364, 2014‏
20162014
Architecture of the human regulatory network derived from ENCODE data‏
MB Gerstein, A Kundaje, M Hariharan, SG Landt, KK Yan, C Cheng, ...‏
Nature 489 (7414), 91-100, 2012‏
17232012
Wilds: A benchmark of in-the-wild distribution shifts‏
PW Koh, S Sagawa, H Marklund, SM Xie, M Zhang, A Balsubramani, ...‏
International conference on machine learning, 5637-5664, 2021‏
15682021
Expanded encyclopaedias of DNA elements in the human and mouse genomes‏
JE Moore, MJ Purcaro, HE Pratt, CB Epstein, N Shoresh, J Adrian, T Kawli, ...‏
Nature 583 (7818), 699-710, 2020‏
15612020
The ENCODE blacklist: identification of problematic regions of the genome‏
HM Amemiya, A Kundaje, AP Boyle‏
Scientific reports 9 (1), 9354, 2019‏
15032019
A user's guide to the encyclopedia of DNA elements (ENCODE)‏
ENCODE Project Consortium‏
PLoS Biol 9 (4), e1001046, 2011‏
14982011
Lineage-specific and single-cell chromatin accessibility charts human hematopoiesis and leukemia evolution‏
MR Corces, JD Buenrostro, B Wu, PG Greenside, SM Chan, JL Koenig, ...‏
Nature genetics 48 (10), 1193-1203, 2016‏
11462016
Sequence features and chromatin structure around the genomic regions bound by 119 human transcription factors‏
J Wang, J Zhuang, S Iyer, XY Lin, TW Whitfield, MC Greven, BG Pierce, ...‏
Genome research 22 (9), 1798-1812, 2012‏
10852012
Linking disease associations with regulatory information in the human genome‏
MA Schaub, AP Boyle, A Kundaje, S Batzoglou, M Snyder‏
Genome research 22 (9), 1748-1759, 2012‏
9152012
Defining functional DNA elements in the human genome‏
M Kellis, B Wold, MP Snyder, BE Bernstein, A Kundaje, GK Marinov, ...‏
Proceedings of the National Academy of Sciences 111 (17), 6131-6138, 2014‏
9032014
Opportunities and challenges for transcriptome-wide association studies‏
M Wainberg, N Sinnott-Armstrong, N Mancuso, AN Barbeira, DA Knowles, ...‏
Nature genetics 51 (4), 592-599, 2019‏
8112019
Integrative analysis of 111 reference human epigenomes‏
CR Epigenomics, A Kundaje, W Meuleman, J Ernst, M Bilenky, A Yen, ...‏
Nature 518 (7539), 317-330, 2015‏
8062015
Fine mapping of type 1 diabetes susceptibility loci and evidence for colocalization of causal variants with lymphoid gene enhancers‏
S Onengut-Gumuscu, WM Chen, O Burren, NJ Cooper, AR Quinlan, ...‏
Nature genetics 47 (4), 381-386, 2015‏
7322015
Integrative annotation of chromatin elements from ENCODE data‏
MM Hoffman, J Ernst, SP Wilder, A Kundaje, RS Harris, M Libbrecht, ...‏
Nucleic acids research 41 (2), 827-841, 2013‏
6312013
سیستم در حال حاضر قادر به انجام عملکرد نیست. بعداً دوباره امتحان کنید.
مقاله‌ها 1–20