| Genomic and bioinformatic profiling of mutational neoepitopes reveals new rules to predict anticancer immunogenicity F Duan, J Duitama, S Al Seesi, CM Ayres, SA Corcelli, AP Pawashe, ... The Journal of experimental medicine 211 (11), 2231-2248, 2014 | 458 | 2014 |
| Fosmid-based whole genome haplotyping of a HapMap trio child: evaluation of Single Individual Haplotyping techniques J Duitama, GK McEwen, T Huebsch, S Palczewski, S Schulz, ... Nucleic acids research 40 (5), 2041-2053, 2012 | 157 | 2012 |
| Structural variants in 3000 rice genomes RR Fuentes, D Chebotarov, J Duitama, S Smith, JF De la Hoz, ... Genome research 29 (5), 870-880, 2019 | 145 | 2019 |
| An integrated framework for discovery and genotyping of genomic variants from high-throughput sequencing experiments J Duitama, JC Quintero, DF Cruz, C Quintero, G Hubmann, ... Nucleic acids research 42 (6), e44-e44, 2014 | 138 | 2014 |
| A comprehensively molecular haplotype-resolved genome of a European individual EK Suk, GK McEwen, J Duitama, K Nowick, S Schulz, S Palczewski, ... Genome research 21 (10), 1672-1685, 2011 | 112 | 2011 |
| Comparative polygenic analysis of maximal ethanol accumulation capacity and tolerance to high ethanol levels of cell proliferation in yeast TM Pais, MR Foulquié-Moreno, G Hubmann, J Duitama, S Swinnen, ... PLoS genetics 9 (6), e1003548, 2013 | 108 | 2013 |
| Resequencing of common bean identifies regions of inter–gene pool introgression and provides comprehensive resources for molecular breeding JD Lobaton, T Miller, J Gil, D Ariza, JF de la Hoz, A Soler, S Beebe, ... The plant genome 11 (2), 170068, 2018 | 89 | 2018 |
| Whole Genome Sequencing of Elite Rice Cultivars as a Comprehensive Information Resource for Marker Assisted Selection J Duitama, A Silva, Y Sanabria, DF Cruz, C Quintero, C Ballen, M Lorieux, ... PLoS One 10 (4), e0124617, 2015 | 87 | 2015 |
| ReFHap: a reliable and fast algorithm for single individual haplotyping J Duitama, T Huebsch, G McEwen, EK Suk, MR Hoehe Proceedings of the First ACM International Conference on Bioinformatics and …, 2010 | 85 | 2010 |
| Bioinformatic analysis of genotype by sequencing (GBS) data with NGSEP C Perea, JF De La Hoz, DF Cruz, JD Lobaton, P Izquierdo, JC Quintero, ... BMC Genomics 17 (5), 498, 2016 | 84 | 2016 |
| Large-scale analysis of tandem repeat variability in the human genome J Duitama, A Zablotskaya, R Gemayel, A Jansen, S Belet, JR Vermeesch, ... Nucleic acids research 42 (9), 5728-5741, 2014 | 81 | 2014 |
| NGSEP3: accurate variant calling across species and sequencing protocols D Tello, J Gil, CD Loaiza, JJ Riascos, N Cardozo, J Duitama Bioinformatics 35 (22), 4716-4723, 2019 | 78 | 2019 |
| Combining image analysis, genome wide association studies and different field trials to reveal stable genetic regions related to panicle architecture and the number of … MC Rebolledo, AL Peña, J Duitama, DF Cruz, M Dingkuhn, C Grenier, ... Frontiers in plant science 7, 1384, 2016 | 72 | 2016 |
| Phenotypic and genetic dissection of component traits for early vigour in rice using plant growth modelling, sugar content analyses and association mapping MC Rebolledo, M Dingkuhn, B Courtois, Y Gibon, A Clément-Vidal, ... Journal of experimental botany 66 (18), 5555-5566, 2015 | 72 | 2015 |
| Comprehensive genomic resources related to domestication and crop improvement traits in Lima bean T Garcia, J Duitama, SS Zullo, J Gil, A Ariani, S Dohle, A Palkovic, ... Nature communications 12 (1), 702, 2021 | 70 | 2021 |
| Genetic mapping for agronomic traits in a MAGIC population of common bean (Phaseolus vulgaris L.) under drought conditions S Diaz, D Ariza-Suarez, P Izquierdo, JD Lobaton, JF de La Hoz, ... BMC genomics 21, 1-20, 2020 | 62 | 2020 |
| Identification of cassava microRNAs under abiotic stress C Ballén-Taborda, G Plata, S Ayling, F Rodríguez-Zapata, ... International journal of genomics 2013 (1), 857986, 2013 | 61 | 2013 |
| Towards accurate detection and genotyping of expressed variants from whole transcriptome sequencing data J Duitama, PK Srivastava, II Măndoiu BMC genomics 13 (Suppl 2), S6, 2012 | 60 | 2012 |
| Identification of multiple interacting alleles conferring low glycerol and high ethanol yield in Saccharomyces cerevisiae ethanolic fermentation G Hubmann, L Mathé, MR Foulquié-Moreno, J Duitama, E Nevoigt, ... Biotechnol Biofuels 6, 87, 2013 | 55 | 2013 |
| Quantitative trait analysis of yeast biodiversity yields novel gene tools for metabolic engineering G Hubmann, MR Foulquié-Moreno, E Nevoigt, J Duitama, N Meurens, ... Metabolic engineering 17, 68-81, 2013 | 54 | 2013 |
K.J. VerstrepenProfessor, KU Leuven and Group Leader, VIBایمیل تأیید شده در biw.vib-kuleuven.be