دنبال کردن
Zhen Xia
Zhen Xia
PhD of Computational Biomedical Engineering, The University of Texas at Austin
ایمیل تأیید شده در utexas.edu
عنوان
نقل شده توسط
نقل شده توسط
سال
Polarizable atomic multipole-based AMOEBA force field for proteins
Y Shi, Z Xia, J Zhang, R Best, C Wu, JW Ponder, P Ren
Journal of chemical theory and computation 9 (9), 4046-4063, 2013
7522013
QTLNetwork: mapping and visualizing genetic architecture of complex traits in experimental populations
J Yang, C Hu, H Hu, R Yu, Z Xia, X Ye, J Zhu
Bioinformatics 24 (5), 721-723, 2008
4742008
Coarse-grained model for simulation of RNA three-dimensional structures
Z Xia, DP Gardner, RR Gutell, P Ren
The Journal of Physical Chemistry B 114 (42), 13497-13506, 2010
1112010
RNA 3D structure prediction by using a coarse-grained model and experimental data
Z Xia, DR Bell, Y Shi, P Ren
The Journal of Physical Chemistry B 117 (11), 3135-3144, 2013
932013
Molecular dynamics simulations of Ago silencing complexes reveal a large repertoire of admissible ‘seed-less’ targets
Z Xia, P Clark, T Huynh, P Loher, Y Zhao, HW Chen, I Rigoutsos, R Zhou
Scientific reports 2 (1), 569, 2012
912012
Hydrophobic interaction drives surface-assisted epitaxial assembly of amyloid-like peptides
S Kang, T Huynh, Z Xia, Y Zhang, H Fang, G Wei, R Zhou
Journal of the American Chemical Society 135 (8), 3150-3157, 2013
692013
Collapse of Unfolded Proteins in a Mixture of Denaturants
Z Xia, P Das, EI Shakhnovich, R Zhou
Journal of the American Chemical Society, 2012
582012
UV-radiation induced disruption of dry-cavities in human γD-crystallin results in decreased stability and faster unfolding
Z Xia, Z Yang, T Huynh, JA King, R Zhou
Scientific reports 3 (1), 1560, 2013
532013
Gay-Berne and electrostatic multipole based coarse-grain potential in implicit solvent
J Wu, X Zhen, H Shen, G Li, P Ren
The Journal of chemical physics 135 (15), 2011
422011
Using a mutual information-based site transition network to map the genetic evolution of influenza A/H3N2 virus
Z Xia, G Jin, J Zhu, R Zhou
Bioinformatics 25 (18), 2309-2317, 2009
412009
Molecular mechanism of surface-assisted epitaxial self-assembly of amyloid-like peptides
S Kang, H Li, T Huynh, F Zhang, Z Xia, Y Zhang, R Zhou
ACS nano 6 (10), 9276-9282, 2012
372012
Recognition mechanism of siRNA by viral p19 suppressor of RNA silencing: a molecular dynamics study
Z Xia, Z Zhu, J Zhu, R Zhou
Biophysical journal 96 (5), 1761-1769, 2009
372009
A sub-linear, massive-scale look-alike audience extension system a massive-scale look-alike audience extension
Q Ma, M Wen, Z Xia, D Chen
Workshop on Big Data, Streams and Heterogeneous Source Mining: Algorithms …, 2016
342016
Free-energy simulations reveal that both hydrophobic and polar interactions are important for influenza hemagglutinin antibody binding
Z Xia, T Huynh, S Kang, R Zhou
Biophysical Journal 102 (6), 1453-1461, 2012
332012
The folding transition state of protein L is extensive with nonnative interactions (and not small and polarized)
TY Yoo, A Adhikari, Z Xia, T Huynh, KF Freed, R Zhou, TR Sosnick
Journal of Molecular Biology 420 (3), 220-234, 2012
312012
The complex and specific pMHC interactions with diverse HIV-1 TCR clonotypes reveal a structural basis for alterations in CTL function
Z Xia, H Chen, S Kang, T Huynh, JW Fang, PA Lamothe, BD Walker, ...
Scientific reports 4 (1), 4087, 2014
282014
Score look-alike audiences
Q Ma, E Wagh, J Wen, Z Xia, R Ormandi, D Chen
2016 IEEE 16th International Conference on Data Mining Workshops (ICDMW …, 2016
262016
Even with nonnative interactions, the updated folding transition states of the homologs Proteins G & L are extensive and similar
MC Baxa, W Yu, AN Adhikari, L Ge, Z Xia, R Zhou, KF Freed, TR Sosnick
Proceedings of the National Academy of Sciences 112 (27), 8302-8307, 2015
252015
Collapse of a hydrophobic polymer in a mixture of denaturants
P Das, Z Xia, R Zhou
Langmuir 29 (15), 4877-4882, 2013
222013
A Review of Physics-based Coarse-grained Potentials for the Simulations of Protein Structure and Dynamics
H Shen, Z Xia, G Li, P Ren
Annual Reports in Computational Chemistry 8, 129-148, 2012
212012
سیستم در حال حاضر قادر به انجام عملکرد نیست. بعداً دوباره امتحان کنید.
مقاله‌ها 1–20