| Pervasive domestication of defective prophages by bacteria LM Bobay, M Touchon, EPC Rocha Proceedings of the National Academy of Sciences 111 (33), 12127-12132, 2014 | 367 | 2014 |
| The adaptation of temperate bacteriophages to their host genomes LM Bobay, EPC Rocha, M Touchon Molecular biology and evolution 30 (4), 737-751, 2013 | 234 | 2013 |
| Human symbionts inject and neutralize antibacterial toxins to persist in the gut AG Wexler, Y Bao, JC Whitney, LM Bobay, JB Xavier, WB Schofield, ... Proceedings of the National Academy of Sciences 113 (13), 3639-3644, 2016 | 220 | 2016 |
| The evolution of bacterial genome architecture LM Bobay, H Ochman Frontiers in genetics 8, 72, 2017 | 156 | 2017 |
| Biological species are universal across life’s domains LM Bobay, H Ochman Genome Biology and Evolution 9 (3), 491-501, 2017 | 143 | 2017 |
| The repatterning of eukaryotic genomes by random genetic drift M Lynch, LM Bobay, F Catania, JF Gout, M Rho Annual review of genomics and human genetics 12 (1), 347-366, 2011 | 142 | 2011 |
| Factors driving effective population size and pan-genome evolution in bacteria LM Bobay, H Ochman BMC evolutionary biology 18, 1-12, 2018 | 133 | 2018 |
| Antibiotics reduce genetic diversity of core species in the honeybee gut microbiome K Raymann, LM Bobay, NA Moran Molecular ecology 27 (8), 2057-2066, 2018 | 117 | 2018 |
| Biological species in the viral world LM Bobay, H Ochman Proceedings of the National Academy of Sciences 115 (23), 6040-6045, 2018 | 85 | 2018 |
| The chromosomal accommodation and domestication of mobile genetic elements M Touchon, LM Bobay, EPC Rocha Current opinion in microbiology 22, 22-29, 2014 | 75 | 2014 |
| Characterization of novel phages isolated in coagulase-negative staphylococci reveals evolutionary relationships with Staphylococcus aureus phages M Deghorain, LM Bobay, PR Smeesters, S Bousbata, M Vermeersch, ... Journal of bacteriology 194 (21), 5829-5839, 2012 | 75 | 2012 |
| Recombination events are concentrated in the spike protein region of Betacoronaviruses LM Bobay, AC O’Donnell, H Ochman PLoS Genetics 16 (12), e1009272, 2020 | 60 | 2020 |
| Impact of recombination on the base composition of bacteria and archaea LM Bobay, H Ochman Molecular biology and evolution 34 (10), 2627-2636, 2017 | 58 | 2017 |
| Impermanence of bacterial clones LM Bobay, CC Traverse, H Ochman Proceedings of the National Academy of Sciences 112 (29), 8893-8900, 2015 | 56 | 2015 |
| Manipulating or superseding host recombination functions: a dilemma that shapes phage evolvability LM Bobay, M Touchon, EPC Rocha PLoS genetics 9 (9), e1003825, 2013 | 55 | 2013 |
| The prokaryotic species concept and challenges LM Bobay The pangenome: Diversity, dynamics and evolution of genomes, 21-49, 2020 | 42 | 2020 |
| The Search for Therapeutic Bacteriophages Uncovers One New Subfamily and Two New Genera of Pseudomonas-Infecting Myoviridae M Henry, LM Bobay, A Chevallereau, E Saussereau, PJ Ceyssens, ... PloS one 10 (1), e0117163, 2015 | 40 | 2015 |
| Impact of homologous recombination on core genome phylogenies CM Stott, LM Bobay BMC genomics 21, 1-10, 2020 | 34 | 2020 |
| CoreCruncher: Fast and Robust Construction of Core Genomes in Large Prokaryotic Data Sets CD Harris, EL Torrance, K Raymann, LM Bobay Molecular Biology and Evolution 38 (2), 727-734, 2021 | 29 | 2021 |
| ConSpeciFix: classifying prokaryotic species based on gene flow LM Bobay, BSH Ellis, H Ochman Bioinformatics 34 (21), 3738-3740, 2018 | 27 | 2018 |