The fitness consequences of aneuploidy are driven by condition-dependent gene effects AB Sunshine, C Payen, GT Ong, I Liachko, KM Tan, MJ Dunham PLoS biology 13 (5), e1002155, 2015 | 117 | 2015 |
High-throughput identification of adaptive mutations in experimentally evolved yeast populations C Payen, AB Sunshine, GT Ong, JL Pogachar, W Zhao, MJ Dunham PLoS genetics 12 (10), e1006339, 2016 | 90 | 2016 |
The Dynamics of Diverse Segmental Amplifications in Populations of Saccharomyces cerevisiae Adapting to Strong Selection C Payen, SC Di Rienzi, GT Ong, JL Pogachar, JC Sanchez, AB Sunshine, ... G3: Genes, Genomes, Genetics 4 (3), 399-409, 2014 | 89 | 2014 |
High-plex multiomic analysis in FFPE tissue at single-cellular and subcellular resolution by spatial molecular imaging S He, R Bhatt, B Birditt, C Brown, E Brown, K Chantranuvatana, ... BioRxiv, 2021.11. 03.467020, 2021 | 85 | 2021 |
A polyploid admixed origin of beer yeasts derived from European and Asian wine populations JC Fay, P Liu, GT Ong, MJ Dunham, GA Cromie, EW Jeffery, CL Ludlow, ... PLoS Biology 17 (3), e3000147, 2019 | 78 | 2019 |
Origin-dependent inverted-repeat amplification: tests of a model for inverted DNA amplification BJ Brewer, C Payen, SC Di Rienzi, MM Higgins, G Ong, MJ Dunham, ... PLoS Genetics 11 (12), e1005699, 2015 | 49 | 2015 |
Comprehensive Analysis of the SUL1 Promoter of Saccharomyces cerevisiae MS Rich, C Payen, AF Rubin, GT Ong, MR Sanchez, N Yachie, ... Genetics 203 (1), 191-202, 2016 | 32 | 2016 |
Aneuploidy shortens replicative lifespan in Saccharomyces cerevisiae AB Sunshine, GT Ong, DP Nickerson, D Carr, CJ Murakami, BM Wasko, ... Aging Cell 15 (2), 317-324, 2016 | 27 | 2016 |
Ultra high-plex spatial proteogenomic investigation of giant cell glioblastoma multiforme immune infiltrates reveals distinct protein and RNA expression profiles SA Bonnett, AB Rosenbloom, GT Ong, M Conner, ABE Rininger, ... Cancer Research Communications 3 (5), 763-779, 2023 | 10 | 2023 |
Subcellular characterization of over 100 proteins in FFPE tumor biopsies with CosMx Spatial Molecular Imager ZR Lewis, T Phan-Everson, G Geiss, M Korukonda, R Bhatt, C Brown, ... Cancer Research 82 (12_Supplement), 3878-3878, 2022 | 6 | 2022 |
Validation of novel high-plex protein spatial profiling quantitation based on NanoString's Digital Spatial Profiling (DSP) technology with quantitative fluorescence (QIF) MI Toki, C Merritt, G Ong, JM Beechem, DE Carvajal-Hausdorf, Y Bai, ... Cancer Research 77 (13_Supplement), 3810-3810, 2017 | 6 | 2017 |
A machine learning one-class logistic regression model to predict stemness for single cell transcriptomics and spatial omics FS Dezem, M Marção, B Ben-Cheikh, N Nikulina, A Omotoso, D Burnett, ... BMC genomics 24 (1), 717, 2023 | 5 | 2023 |
Empirical determinants of adaptive mutations in yeast experimental evolution C Payen, AB Sunshine, GT Ong, JL Pogachar, W Zhao, MJ Dunham bioRxiv, 014068, 2015 | 5 | 2015 |
A new approach for immuno-oncology biomarker discovery: High-plex, spatial protein profiling based on NanoString digital quantification. D Lee, Y Liang, C Merritt, F Pakiam, G Ong, S Weng, D Dunaway, J Jung, ... Journal of Clinical Oncology 35 (7_suppl), 27-27, 2017 | 4 | 2017 |
A complete pipeline for high‐plex spatial proteomic profiling and analysis of neural cell phenotypes on the CosMx™ Spatial Molecular Imager and AtoMx™ Spatial Informatics … A Rosenbloom, S Bonnett, M Conner, T Phan‐Everson, Z Lewis, G Ong, ... Alzheimer's & Dementia 19, e076665, 2023 | 3 | 2023 |
spatially resolved, multiplexed digital characterization of protein and mRNA distribution and abundance in formalin-fixed, paraffin-embedded (FFPE) tissue sections based on … C Merritt, J Jung, G Ong, Y Liang, F Pakiam, D Dunaway, I Sprague, ... Cancer Research 77 (13_Supplement), 3955-3955, 2017 | 3 | 2017 |
Molecular characterization of immune-related severe adverse events (irSAE) JM Balko, RN Al-Rohil, DY Wang, Y Liang, G Ong, K Barker, M Compton, ... JCO 35, 3076, 2017 | 2 | 2017 |
Single cell spatial molecular imaging of 76-plex proteins in clinical cancer samples in response to personalized treatment ZR Lewis, B Birditt, E Brown, K Chantranuvatana, B Filanoski, C Corless, ... Cancer Research 83 (7_Supplement), 5641-5641, 2023 | 1 | 2023 |
High-plex immune marker spatial profiling quantitation by NanoString Digital Spatial Profiling technology and quantitative immunofluorescence MI Toki, PF Wong, H Kluger, Y Liu, C Merritt, G Ong, S Warren, ... Cancer Research 78 (13_Supplement), 3621-3621, 2018 | 1 | 2018 |
Multidimensional spatial characterization of the tumor microenvironment (TME) in synchronous melanoma metastases (SMM) to yield insights into mixed responses to therapy in … A Reuben, MT Tetzlaff, C Spencer, G Ong, K Barker, PA Prieto, C Vellano, ... Journal of Clinical Oncology 35 (15_suppl), 9575-9575, 2017 | 1 | 2017 |