Sex-related alterations of gut microbiota composition in the BTBR mouse model of autism spectrum disorder L Coretti, C Cristiano, E Florio, G Scala, A Lama, S Keller, M Cuomo, ... Scientific reports 7 (1), 45356, 2017 | 188 | 2017 |
Genome-wide mapping of 8-oxo-7, 8-dihydro-2′-deoxyguanosine reveals accumulation of oxidatively-generated damage at DNA replication origins within transcribed long genes of … S Amente, G Di Palo, G Scala, T Castrignanò, F Gorini, S Cocozza, ... Nucleic acids research 47 (1), 221-236, 2019 | 108 | 2019 |
Towards a comprehensive view of 8-oxo-7, 8-dihydro-2’-deoxyguanosine: Highlighting the intertwined roles of DNA damage and epigenetics in genomic instability F Gorini, G Scala, MS Cooke, B Majello, S Amente DNA repair 97, 103027, 2021 | 60 | 2021 |
The genomic landscape of 8-oxodG reveals enrichment at specific inherently fragile promoters F Gorini, G Scala, G Di Palo, GI Dellino, S Cocozza, PG Pelicci, L Lania, ... Nucleic acids research 48 (8), 4309-4324, 2020 | 54 | 2020 |
Gain-of-function CEBPE mutation causes noncanonical autoinflammatory inflammasomopathy H Göös, CL Fogarty, B Sahu, V Plagnol, K Rajamäki, K Nurmi, X Liu, ... Journal of Allergy and Clinical Immunology 144 (5), 1364-1376, 2019 | 52 | 2019 |
Carbon nanomaterials promote M1/M2 macrophage activation PAS Kinaret, G Scala, A Federico, J Sund, D Greco Small 16 (21), 1907609, 2020 | 48 | 2020 |
Multi-omics analysis of ten carbon nanomaterials effects highlights cell type specific patterns of molecular regulation and adaptation G Scala, P Kinaret, V Marwah, J Sund, V Fortino, D Greco NanoImpact 11, 99-108, 2018 | 45 | 2018 |
eUTOPIA: solUTion for Omics data PreprocessIng and Analysis VS Marwah, G Scala, PAS Kinaret, A Serra, H Alenius, V Fortino, D Greco Source code for biology and medicine 14, 1-12, 2019 | 44 | 2019 |
FunMappOne: a tool to hierarchically organize and visually navigate functional gene annotations in multiple experiments G Scala, A Serra, VS Marwah, LA Saarimäki, D Greco BMC bioinformatics 20, 1-7, 2019 | 39 | 2019 |
Inform: inference of network response modules VS Marwah, PAS Kinaret, A Serra, G Scala, A Lauerma, V Fortino, ... Bioinformatics 34 (12), 2136-2138, 2018 | 38 | 2018 |
A review of COVID-19 biomarkers and drug targets: resources and tools FP Caruso, G Scala, L Cerulo, M Ceccarelli Briefings in bioinformatics 22 (2), 701-713, 2021 | 37 | 2021 |
Immune‐microbiota interaction in Finnish and Russian Karelia young people with high and low allergy prevalence L Ruokolainen, N Fyhrquist, T Laatikainen, P Auvinen, V Fortino, G Scala, ... Clinical & Experimental Allergy 50 (10), 1148-1158, 2020 | 35 | 2020 |
ampliMethProfiler: a pipeline for the analysis of CpG methylation profiles of targeted deep bisulfite sequenced amplicons G Scala, O Affinito, D Palumbo, E Florio, A Monticelli, G Miele, L Chiariotti, ... BMC bioinformatics 17, 1-12, 2016 | 33 | 2016 |
Cholesteatoma vs granulation tissue: a differential diagnosis by DWI-MRI apparent diffusion coefficient M Cavaliere, AM Di Lullo, E Cantone, G Scala, A Elefante, C Russo, ... European Archives of Oto-Rhino-Laryngology 275, 2237-2243, 2018 | 32 | 2018 |
DNA sequence context as a marker of CpG methylation instability in normal and cancer tissues G Scala, A Federico, D Palumbo, S Cocozza, D Greco Scientific reports 10 (1), 1721, 2020 | 25 | 2020 |
Tracking the evolution of epialleles during neural differentiation and brain development: D-Aspartate oxidase as a model gene E Florio, S Keller, L Coretti, O Affinito, G Scala, F Errico, A Fico, F Boscia, ... Epigenetics 12 (1), 41-54, 2017 | 25 | 2017 |
Feature set optimization in biomarker discovery from genome-scale data V Fortino, G Scala, D Greco Bioinformatics 36 (11), 3393-3400, 2020 | 24 | 2020 |
DNA methylation levels in mononuclear leukocytes from the mother and her child are associated with IgE sensitization to allergens in early life N Acevedo, G Scala, SK Merid, P Frumento, S Bruhn, A Andersson, ... International journal of molecular sciences 22 (2), 801, 2021 | 23 | 2021 |
Toxicogenomics analysis of dynamic dose-response in macrophages highlights molecular alterations relevant for multi-walled carbon nanotube-induced lung fibrosis LA Saarimäki, PAS Kinaret, G Scala, G del Giudice, A Federico, A Serra, ... NanoImpact 20, 100274, 2020 | 22 | 2020 |
Simulating gene-gene and gene-environment interactions in complex diseases: Gene-Environment iNteraction Simulator 2 M Pinelli, G Scala, R Amato, S Cocozza, G Miele BMC bioinformatics 13, 1-11, 2012 | 19 | 2012 |