Seuraa
Irina Koester
Nimike
Viittaukset
Viittaukset
Vuosi
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ...
Nature biotechnology 37 (8), 852-857, 2019
184842019
Feature-based molecular networking in the GNPS analysis environment
LF Nothias, D Petras, R Schmid, K Dührkop, J Rainer, A Sarvepalli, ...
Nature Methods, 1-4, 2020
10772020
Biological Impacts of the 2013–2015 Warm-Water Anomaly in the Northeast Pacific: Winners, Losers, and the Future
PJSF Letícia M. Cavole, Alyssa M. Demko, Rachel E. Diner, Ashlyn Giddings ...
Oceanography 29 (2), 2016
7622016
Reproducible molecular networking of untargeted mass spectrometry data using GNPS
AT Aron, EC Gentry, KL McPhail, LF Nothias, M Nothias-Esposito, ...
Nature protocols 15 (6), 1954-1991, 2020
5382020
Ion identity molecular networking for mass spectrometry-based metabolomics in the GNPS environment
R Schmid, D Petras, LF Nothias, M Wang, AT Aron, A Jagels, H Tsugawa, ...
Nature communications 12 (1), 3832, 2021
2192021
Database-independent molecular formula annotation using Gibbs sampling through ZODIAC
M Ludwig, LF Nothias, K Dührkop, I Koester, M Fleischauer, MA Hoffmann, ...
Nature Machine Intelligence 2 (10), 629-641, 2020
188*2020
High-resolution liquid chromatography tandem mass spectrometry enables large scale molecular characterization of dissolved organic matter
D Petras, I Koester, R Da Silva, BM Stephens, AF Haas, CE Nelson, ...
Frontiers in Marine Science 4, 405, 2017
1292017
A community resource for paired genomic and metabolomic data mining
MA Schorn, S Verhoeven, L Ridder, F Huber, DD Acharya, AA Aksenov, ...
Nature Chemical Biology 17 (4), 363-368, 2021
1192021
Untargeted mass spectrometry-based metabolomics approach unveils molecular changes in raw and processed foods and beverages
JM Gauglitz, CM Aceves, AA Aksenov, G Aleti, J Almaliti, A Bouslimani, ...
Food chemistry 302, 125290, 2020
672020
Distinguishing the molecular diversity, nutrient content, and energetic potential of exometabolomes produced by macroalgae and reef-building corals
L Wegley Kelly, CE Nelson, D Petras, I Koester, ZA Quinlan, MGI Arts, ...
Proceedings of the National Academy of Sciences 119 (5), e2110283119, 2022
632022
Mass spectrometry-based visualization of molecules associated with human habitats
D Petras, LF Nothias, RA Quinn, T Alexandrov, N Bandeira, A Bouslimani, ...
Analytical chemistry 88 (22), 10775-10784, 2016
552016
Short-term dynamics of North Sea bacterioplankton-dissolved organic matter coherence on molecular level
J Lucas, I Koester, A Wichels, J Niggemann, T Dittmar, U Callies, ...
Frontiers in Microbiology 7, 321, 2016
542016
Spatiotemporal variability in seawater carbon chemistry for a coral reef flat in Kāne ‘ohe Bay, Hawai ‘i
HN Page, TA Courtney, EH De Carlo, NM Howins, I Koester, ...
Limnology and Oceanography 64 (3), 913-934, 2019
322019
Substantial oxygen consumption by aerobic nitrite oxidation in oceanic oxygen minimum zones
JM Beman, SM Vargas, JM Wilson, E Perez-Coronel, JS Karolewski, ...
Nature Communications 12 (1), 7043, 2021
232021
Molecular commerce on coral reefs: using metabolomics to reveal biochemical exchanges underlying holobiont biology and the ecology of coastal ecosystems
L Wegley Kelly, CE Nelson, LI Aluwihare, MGI Arts, PC Dorrestein, ...
Frontiers in Marine Science 8, 630799, 2021
172021
Illuminating the dark metabolome of Pseudo-nitzschia-microbiome associations
I Koester, ZA Quinlan, LF Nothias, ME White, A Rabines, D Petras, ...
Environmental microbiology, 2022
152022
ConCISE: Consensus Annotation Propagation of Ion Features in Untargeted Tandem Mass Spectrometry Combining Molecular Networking and In Silico Metabolite …
ZA Quinlan, I Koester, AT Aron, D Petras, LI Aluwihare, PC Dorrestein, ...
Metabolites 12 (12), 1275, 2022
142022
Refractory dissolved organic matter has similar chemical characteristics but different radiocarbon signatures with depth in the marine water column
ME White, TB Nguyen, I Koester, MC Lardie Gaylord, JM Beman, ...
Global Biogeochemical Cycles 37 (4), e2022GB007603, 2023
62023
Coral thermal stress and bleaching enrich and restructure reef microbial communities via altered organic matter exudation
WJ Sparagon, MGI Arts, ZA Quinlan, L Wegley Kelly, I Koester, ...
Communications Biology 7 (1), 160, 2024
22024
Two-Dimensional Liquid Chromatography Tandem-Mass Spectrometry Untangles the Deep Metabolome of Marine Dissolved Organic Matter
SP Lambidis, T Schramm, K Steuer-Lodd, S Farrell, P Stincone, R Schmid, ...
22023
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Artikkelit 1–20