| scRNA-seq in medulloblastoma shows cellular heterogeneity and lineage expansion support resistance to SHH inhibitor therapy J Ocasio, B Babcock, D Malawsky, SJ Weir, L Loo, JM Simon, MJ Zylka, ... Nature communications 10 (1), 1-17, 2019 | 107 | 2019 |
| Transcriptional reprogramming of infiltrating neutrophils drives lung pathology in severe COVID-19 despite low viral load DJ Eddins, J Yang, A Kosters, VD Giacalone, X Pechuan-Jorge, ... Blood advances 7 (5), 778-799, 2023 | 25 | 2023 |
| Protracted yet Coordinated Differentiation of Long-Lived SARS-CoV-2-Specific CD8+ T Cells during Convalescence T Ma, H Ryu, M McGregor, B Babcock, J Neidleman, G Xie, AF George, ... The Journal of Immunology 207 (5), 1344-1356, 2021 | 19 | 2021 |
| Cryptic developmental events determine medulloblastoma radiosensitivity and cellular heterogeneity without altering transcriptomic profile DS Malawsky, SJ Weir, JK Ocasio, B Babcock, T Dismuke, AH Cleveland, ... Communications biology 4 (1), 1-16, 2021 | 17 | 2021 |
| Antiapoptotic Bcl-2 family proteins BCL-xL and MCL-1 integrate neural progenitor survival and proliferation during postnatal cerebellar neurogenesis KA Veleta, AH Cleveland, BR Babcock, YW He, D Hwang, ... Cell Death & Differentiation 28 (5), 1579-1592, 2021 | 16 | 2021 |
| Noncanonical activation of GLI signaling in SOX2+ cells drives medulloblastoma relapse M Swiderska-Syn, J Mir-Pedrol, A Oles, O Schleuger, AD Salvador, ... Science Advances 8 (29), eabj9138, 2022 | 14 | 2022 |
| Projected t-SNE for batch correction E Aliverti, JL Tilson, DL Filer, B Babcock, A Colaneri, J Ocasio, ... Bioinformatics 36 (11), 3522-3527, 2020 | 14 | 2020 |
| Comprehensive multi-omics single-cell data integration reveals greater heterogeneity in the human immune system C Xu, J Yang, A Kosters, BR Babcock, P Qiu, EEB Ghosn Iscience 25 (10), 2022 | 13 | 2022 |
| Author Correction: scRNA-seq in medulloblastoma shows cellular heterogeneity and lineage expansion support resistance to SHH inhibitor therapy JK Ocasio, B Babcock, D Malawsky, SJ Weir, L Loo, JM Simon, MJ Zylka, ... Nature Communications 13, 2022 | 6 | 2022 |
| Data matrix normalization and merging strategies minimize batch-specific systemic variation in scRNA-seq data BR Babcock, A Kosters, J Yang, ML White, EEB Ghosn bioRxiv, 2021.08. 18.456898, 2021 | 5 | 2021 |
| Transient anti-interferon autoantibodies in the airways are associated with efficient recovery from COVID-19 BR Babcock, A Kosters, DJ Eddins, MSB Donaire, S Sarvadhavabhatla, ... medRxiv, 2024.01. 11.24301000, 2024 | 3 | 2024 |
| Pathogenic neutrophilia drives acute respiratory distress syndrome in severe COVID-19 patients DJ Eddins, J Yang, A Kosters, VD Giacalone, X Pechuan, JD Chandler, ... bioRxiv, 2021.06. 02.446468, 2021 | 3 | 2021 |
| Transient anti-interferon autoantibodies in the airways are associated with recovery from COVID-19 BR Babcock, A Kosters, DJ Eddins, MSB Donaire, S Sarvadhavabhatla, ... Science Translational Medicine 16 (772), eadq1789, 2024 | 1 | 2024 |
| scRNA-seq for microcephaly research [III]: computational analysis of scRNA-seq data B Babcock, D Malawsky Microcephaly: Methods and Protocols, 105-121, 2022 | 1 | 2022 |
| scRNA-seq for microcephaly research [I]: single-cell droplet encapsulation, mRNA capture, and cDNA synthesis B Babcock, S Weir Microcephaly: Methods and Protocols, 83-97, 2022 | 1 | 2022 |
| scRNA-seq for microcephaly research [II]: preparation of single-cell cDNA libraries B Babcock, S Weir Microcephaly: Methods and Protocols, 99-104, 2022 | 1 | 2022 |
| MBRS-51. SINGLE CELL TRANSCRIPTOMIC ANALYSIS DEFINES DISCRETE SUBPOPULATIONS IN SHH-DRIVEN MEDULLOBLASTOMAS THAT ARE DIFFERENTIALLY AFFECTED BY VISMODEGIB J Ocasio, B Babcock, A Colaneri, M Taylor, K Wilhelmsen, T Gershon Neuro-oncology 20 (Suppl 2), i139, 2018 | 1 | 2018 |
| Transient Anti-Interferon Auto Antibodies in the Airway Are Associated with Recovery in Mild COVID-19 BR Babcock, A Kosters, NR Roan, S Lee, EEB Ghosn Blood 142, 156, 2023 | | 2023 |
| scRNA-seq in medulloblastoma shows cellular heterogeneity and lineage expansion support resistance to SHH inhibitor therapy (vol 10, 5829, 2019) JK Ocasio, B Babcock, D Malawsky, SJ Weir, L Loo, JM Simon, MJ Zylka, ... NATURE COMMUNICATIONS 13 (1), 2022 | | 2022 |
| Astrocytic sox2 (+) cells relay in non-canonical gli signaling to facilitate medulloblastoma relapse. M Swiderska Syn, J Mir Pedrol, A Oles, B Babcock, V Martín Fernández, ... Neuro-Oncology, 2022 | | 2022 |
