| Deep whole-genome ctDNA chronology of treatment-resistant prostate cancer C Herberts, M Annala, J Sipola, SWS Ng, XE Chen, A Nurminen, ... Nature 608 (7921), 199-208, 2022 | 125 | 2022 |
| Prospective evaluation of clinical outcomes using a multiplex liquid biopsy targeting diverse resistance mechanisms in metastatic prostate cancer JM Sperger, H Emamekhoo, RR McKay, CN Stahlfeld, A Singh, XE Chen, ... Journal of Clinical Oncology 39 (26), 2926-2937, 2021 | 52 | 2021 |
| Multiregion sampling of de novo metastatic prostate cancer reveals complex polyclonality and augments clinical genotyping EW Warner, K Van der Eecken, AJ Murtha, EM Kwan, C Herberts, J Sipola, ... Nature Cancer 5 (1), 114-130, 2024 | 16 | 2024 |
| Regulatory activity is the default DNA state in eukaryotes I Luthra, C Jensen, XE Chen, AL Salaudeen, AM Rafi, CG de Boer Nature Structural & Molecular Biology 31 (3), 559-567, 2024 | 6 | 2024 |
| Biochemical activity is the default DNA state in eukaryotes I Luthra, XE Chen, C Jensen, AM Rafi, AL Salaudeen, CG de Boer bioRxiv, 2022.12. 16.520785, 2022 | 6 | 2022 |
| Modeling the trajectory of SARS-CoV-2 spike protein evolution in continuous latent space using a neural network and Gaussian process S King, XE Chen, SWS Ng, K Rostin, T Roberts, SV Hahn, JC Schwab, ... bioRxiv, 2021.12. 04.471198, 2021 | 3 | 2021 |
| Forecasting SARS-CoV-2 spike protein evolution from small data by deep learning and regression S King, XE Chen, SWS Ng, K Rostin, SV Hahn, T Roberts, JC Schwab, ... Frontiers in Systems Biology 4, 1284668, 2024 | 1 | 2024 |
| GIL: a python package for designing custom indexing primers N Mateyko, O Tariq, XE Chen, W Cheney, AL Salaudeen, I Luthra, ... Bioinformatics 39 (6), btad328, 2023 | 1 | 2023 |
| Targeting Interferon-Driven Inflammatory Memory Prevents Epigenetic Evolution of Cancer Immunotherapy Resistance J Qiu, D Ye, XE Chen, N Dangle, B Yoshor, T Zhang, Y Shao, ... bioRxiv, 2024.08. 13.607862, 2024 | | 2024 |
| Young innovators and the bioeconomy XE Chen, S King, SWS Ng, P Salman, JC Schwab, P Sekhon Genomics and the Global Bioeconomy, 83-100, 2023 | | 2023 |