| Antisense transcription‐dependent chromatin signature modulates sense transcript dynamics T Brown, FS Howe, SC Murray, M Wouters, P Lorenz, E Seward, S Rata, ... Molecular systems biology 14 (2), e8007, 2018 | 48 | 2018 |
| Gene losses in the common vampire bat illuminate molecular adaptations to blood feeding M Blumer, T Brown, MB Freitas, AL Destro, JA Oliveira, AE Morales, ... Science advances 8 (12), eabm6494, 2022 | 41 | 2022 |
| SimBac: simulation of whole bacterial genomes with homologous recombination T Brown, X Didelot, DJ Wilson, ND Maio Microbial genomics 2 (1), e000044, 2016 | 33 | 2016 |
| H3K4me3 is neither instructive for, nor informed by, transcription SC Murray, P Lorenz, FS Howe, M Wouters, T Brown, S Xi, H Fischl, ... BioRxiv, 709014, 2019 | 30 | 2019 |
| The European Reference Genome Atlas: piloting a decentralised approach to equitable biodiversity genomics AM Mc Cartney, G Formenti, A Mouton, D De Panis, LS Marins, HG Leitão, ... npj Biodiversity 3 (1), 28, 2024 | 18 | 2024 |
| Spt4 facilitates the movement of RNA polymerase II through the+ 2 nucleosomal barrier Ü Uzun, T Brown, H Fischl, A Angel, J Mellor Cell Reports 36 (13), 2021 | 17 | 2021 |
| Chromosome-scale genome assembly reveals how repeat elements shape non-coding RNA landscapes active during newt limb regeneration T Brown, K Mishra, A Elewa, S Iarovenko, E Subramanian, AJ Araus, ... Cell Genomics, 2025 | 16* | 2025 |
| Efficient precision editing of endogenous Chlamydomonas reinhardtii genes with CRISPR-Cas AP Nievergelt, DR Diener, A Bogdanova, T Brown, G Pigino Cell reports methods 3 (8), 2023 | 16 | 2023 |
| Loss of a gluconeogenic muscle enzyme contributed to adaptive metabolic traits in hummingbirds E Osipova, R Barsacchi, T Brown, K Sadanandan, AH Gaede, A Monte, ... Science 379 (6628), 185-190, 2023 | 15 | 2023 |
| Chiropterans are a hotspot for horizontal transfer of DNA transposons in Mammalia NS Paulat, JM Storer, DD Moreno-Santillán, AB Osmanski, KAM Sullivan, ... Molecular biology and evolution 40 (5), msad092, 2023 | 13 | 2023 |
| Bat genomes illuminate adaptations to viral tolerance and disease resistance AE Morales, Y Dong, T Brown, K Baid, DG Kontopoulos, V Gonzalez, ... Nature, 1-10, 2025 | 12* | 2025 |
| A comparative analysis of planarian genomes reveals regulatory conservation in the face of rapid structural divergence M Ivanković, JN Brand, L Pandolfini, T Brown, M Pippel, A Rozanski, ... Nature Communications 15 (1), 8215, 2024 | 11 | 2024 |
| Expanded olfactory system in ray-finned fishes capable of terrestrial exploration D Burguera, F Dionigi, K Kverková, S Winkler, T Brown, M Pippel, ... BMC biology 21 (1), 163, 2023 | 8 | 2023 |
| WorkflowHub: a registry for computational workflows OJR Gustafsson, SR Wilkinson, F Bacall, L Pireddu, S Soiland-Reyes, ... arXiv preprint arXiv:2410.06941, 2024 | 6 | 2024 |
| Avoidable false PSMC population size peaks occur across numerous studies L Hilgers, S Liu, A Jensen, T Brown, T Cousins, R Schweiger, ... bioRxiv, 2024.06. 17.599025, 2024 | 6 | 2024 |
| Building a Portuguese coalition for biodiversity genomics JP Marques, PC Alves, IR Amorim, RJ Lopes, M Moura, E Myers, ... npj Biodiversity 3 (1), 27, 2024 | 2 | 2024 |
| A chromosome-level, haplotype-resolved genome assembly and annotation for the Eurasian minnow (Leuciscidae - Phoxinus phoxinus) provide evidence of … TO Oriowo, I Chrysostomakis, S Martin, S Kukowka, T Brown, S Winkler, ... bioRxiv, 2023.11. 30.569369, 2023 | 2 | 2023 |
| Mapping Human Transient Transcriptomes Using Single Nucleotide Resolution 4sU Sequencing (SNU-Seq) P Lorenz, A Lamstaes, H Fischl, S Xi, A Saukko-Paavola, S Murray, ... BioRxiv, 2021.07. 14.452379, 2021 | 2 | 2021 |
| Long-read sequencing and genome assembly of natural history collection samples and challenging specimens B Bein, I Chrysostomakis, LS Arantes, T Brown, C Gerheim, T Schell, ... Genome Biology 26 (1), 25, 2025 | 1 | 2025 |
| A Haplotype-resolved reference genome of a long-distance migratory bat, Pipistrellus nathusii (Keyserling & Blasius, 1839) M Driller, T Brown, SE Currie, M Hiller, S Winkler, M Pippel, CC Voigt, ... DNA Research, dsae018, 2024 | 1 | 2024 |
