Suivre
Daipayan Sarkar
Titre
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ChAdOx1 interacts with CAR and PF4 with implications for thrombosis with thrombocytopenia syndrome
AT Baker, RJ Boyd, D Sarkar, A Teijeira-Crespo, CK Chan, E Bates, ...
Science Advances 7 (49), eabl8213, 2021
1672021
Prediction of protein assemblies, the next frontier: The CASP14‐CAPRI experiment
MF Lensink, G Brysbaert, T Mauri, N Nadzirin, S Velankar, RAG Chaleil, ...
Proteins: Structure, Function, and Bioinformatics, 2021
1032021
Cryo-EM model validation recommendations based on outcomes of the 2019 EMDataResource challenge
CL Lawson, A Kryshtafovych, PD Adams, PV Afonine, ML Baker, ...
Nature methods 18 (2), 156-164, 2021
982021
Temperature distribution in multi-layer skin tissue in presence of a tumor
D Sarkar, A Haji-Sheikh, A Jain
International Journal of Heat and Mass Transfer 91, 602-610, 2015
702015
CryoFold: Determining protein structures and data-guided ensembles from cryo-EM density maps
M Shekhar, G Terashi, C Gupta, D Sarkar, G Debussche, NJ Sisco, ...
Matter 4 (10), 3195-3216, 2021
45*2021
The ugly, bad, and good stories of large-scale biomolecular simulations
C Gupta, D Sarkar, DP Tieleman, A Singharoy
Current Opinion in Structural Biology 73, 102338, 2022
442022
Analytical modeling of temperature distribution in an anisotropic cylinder with circumferentially-varying convective heat transfer
D Sarkar, K Shah, A Haji-Sheikh, A Jain
International Journal of Heat and Mass Transfer 79, 1027-1033, 2014
362014
Computational structure modeling for diverse categories of macromolecular interactions
T Aderinwale, CW Christoffer, D Sarkar, E Alnabati, D Kihara
Current opinion in structural biology 64, 1-8, 2020
322020
Flexible fitting of small molecules into electron microscopy maps using molecular dynamics simulations with neural network potentials
JW Vant, SLJ Lahey, K Jana, M Shekhar, D Sarkar, BH Munk, ...
Journal of chemical information and modeling 60 (5), 2591-2604, 2020
302020
Non-invasive, transient determination of the core temperature of a heat-generating solid body
D Anthony, D Sarkar, A Jain
Scientific reports 6 (1), 35886, 2016
252016
Steady state and transient analytical modeling of non-uniform convective cooling of a microprocessor chip due to jet impingement
S Luhar, D Sarkar, A Jain
International Journal of Heat and Mass Transfer 110, 768-777, 2017
232017
Modeling SARS‐CoV‐2 proteins in the CASP‐commons experiment
A Kryshtafovych, J Moult, WM Billings, D Della Corte, K Fidelis, S Kwon, ...
Proteins: Structure, Function, and Bioinformatics 89 (12), 1987-1996, 2021
212021
Non-Arrhenius Reaction-Diffusion Kinetics for Protein Inactivation over a Large Temperature Range#
D Sarkar, P Kang, SO Nielsen, Z Qin
ACS Nano, 2019
192019
Exploring cryo-electron microscopy with molecular dynamics
JW Vant, D Sarkar, J Nguyen, AT Baker, JV Vermaas, A Singharoy
Biochemical Society Transactions 50 (1), 569-581, 2022
172022
Discriminating physiological from non‐physiological interfaces in structures of protein complexes: A community‐wide study
H Schweke, Q Xu, G Tauriello, L Pantolini, T Schwede, F Cazals, ...
Proteomics 23 (17), 2200323, 2023
132023
Genotype & Phenotype in Lowe Syndrome: Specific OCRL1 patient mutations differentially impact cellular phenotypes
S Ramadesikan, L Skiba, J Lee, K Madhivanan, D Sarkar, ADL Fuente, ...
Human Molecular Genetics, 2021
132021
Data-guided Multi-Map variables for ensemble refinement of molecular movies
JW Vant, D Sarkar, E Streitwieser, G Fiorin, R Skeel, JV Vermaas, ...
The Journal of Chemical Physics 153 (21), 2020
132020
Corrections for lateral conduction error in steady state heat transfer measurements
D Sarkar, A Jain, RJ Goldstein, V Srinivasan
International Journal of Thermal Sciences 109, 413-423, 2016
132016
Thermal conduction in an orthotropic sphere with circumferentially varying convection heat transfer
D Sarkar, A Haji-Sheikh, A Jain
International Journal of Heat and Mass Transfer 96, 406-412, 2016
132016
Contactless, non-intrusive core temperature measurement of a solid body in steady-state
D Anthony, D Sarkar, A Jain
International Journal of Heat and Mass Transfer 101, 779-788, 2016
122016
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