| WikiPathways 2024: next generation pathway database A Agrawal, H Balcı, K Hanspers, SL Coort, M Martens, DN Slenter, ... Nucleic acids research 52 (D1), D679-D689, 2024 | 131 | 2024 |
| Newt: a comprehensive web-based tool for viewing, constructing and analyzing biological maps H Balci, MC Siper, N Saleh, I Safarli, L Roy, M Kilicarslan, R Ozaydin, ... Bioinformatics 37 (10), 1475-1477, 2021 | 41 | 2021 |
| Efficient methods and readily customizable libraries for managing complexity of large networks U Dogrusoz, A Karacelik, I Safarli, H Balci, L Dervishi, MC Siper PloS one 13 (5), e0197238, 2018 | 24 | 2018 |
| fCoSE: a fast compound graph layout algorithm with constraint support H Balci, U Dogrusoz IEEE Transactions on Visualization and Computer Graphics 28 (12), 4582-4593, 2021 | 18 | 2021 |
| Sun position estimation and tracking for virtual object placement in time-lapse videos H Balcı, U Güdükbay Signal, Image and Video Processing 11, 817-824, 2017 | 10 | 2017 |
| CoSEP: a compound spring embedder layout algorithm with support for ports A Okka, U Dogrusoz, H Balci Information Visualization 20 (2-3), 151-169, 2021 | 3 | 2021 |
| Sun Position Esimation on Time-Lapse Videos for Augmented Reality Applications H Balcı PQDT-Global, 2015 | 2 | 2015 |
| Immune digital twins for complex human pathologies: applications, limitations, and challenges A Niarakis, R Laubenbacher, G An, Y Ilan, J Fisher, Å Flobak, K Reiche, ... NPJ systems biology and applications 10 (1), 141, 2024 | 1 | 2024 |
| SyBLaRS: A web service for laying out, rendering and mining biological maps in SBGN, SBML and more H Balci, U Dogrusoz, YZ Ozgul, P Atayev PLOS Computational Biology 18 (11), e1010635, 2022 | 1 | 2022 |
| Building an international and interdisciplinary community to develop immune digital twins for complex human pathologies A Niarakis, R Laubenbacher, G An, Y Ilan, J Fisher, Å Flobak, K Reiche, ... Zenodo, https://doi.org/10.5281/zenodo.10783684, 2024 | | 2024 |
| BioDataFuse: Enhancing Data Interoperability through Modular Queries and Knowledge Graph Construction T Abbassi-Daloii, Y Gadiya, A Ammar, E Willighagen, AC Sima, H Balci CEUR Workshop Proceedings 3890, 161-164, 2024 | | 2024 |
| BioHackEU23 report: Extending interoperability of experimental data using modular queries across biomedical resources Y Gadiya, A Ammar, E Willighagen, D Martinat, AC Sima, H Balci, ... OSF, 2023 | | 2023 |
| Fast Compound Graph Layout with Constraint Support H Balcı PQDT-Global, 2022 | | 2022 |
| Cmgv: Algorithms and a Unified Framework for Complexity Management in Graph Visualisation O Zafar, U Dogrusoz, H Balci, AF Halac Available at SSRN 5108313, 0 | | |
| Electronic Appendix H Balcı, G Ugur | | |
Ugur DogrusozProfessor of Computer Engineering, Bilkent University, Ankara, TurkeyAdresse e-mail validée de cs.bilkent.edu.tr