| On the dependency of cellular protein levels on mRNA abundance Y Liu, A Beyer, R Aebersold Cell 165 (3), 535-550, 2016 | 3030 | 2016 |
| Integrated proteogenomic characterization of HBV-related hepatocellular carcinoma Q Gao, H Zhu, L Dong, W Shi, R Chen, Z Song, C Huang, J Li, X Dong, ... Cell 179 (2), 561-577. e22, 2019 | 889 | 2019 |
| Multi-laboratory assessment of reproducibility, qualitative and quantitative performance of SWATH-mass spectrometry BC Collins, CL Hunter, Y Liu, B Schilling, G Rosenberger, SL Bader, ... Nature communications 8 (1), 291, 2017 | 580 | 2017 |
| A repository of assays to quantify 10,000 human proteins by SWATH-MS G Rosenberger, CC Koh, T Guo, HL Röst, P Kouvonen, BC Collins, ... Scientific data 1 (1), 1-15, 2014 | 462 | 2014 |
| Quantitative variability of 342 plasma proteins in a human twin population Y Liu, A Buil, BC Collins, LCJ Gillet, LC Blum, LY Cheng, O Vitek, ... Molecular systems biology 11 (2), 786, 2015 | 373 | 2015 |
| Multi-omic measurements of heterogeneity in HeLa cells across laboratories Y Liu, Y Mi, T Mueller, S Kreibich, EG Williams, A Van Drogen, C Borel, ... Nature biotechnology 37 (3), 314-322, 2019 | 342 | 2019 |
| Protein kinase D at the Golgi controls NLRP3 inflammasome activation Z Zhang, G Meszaros, W He, Y Xu, H de Fatima Magliarelli, L Mailly, ... Journal of Experimental Medicine 214 (9), 2671-2693, 2017 | 280 | 2017 |
| Using data‐independent, high‐resolution mass spectrometry in protein biomarker research: perspectives and clinical applications T Sajic, Y Liu, R Aebersold PROTEOMICS–Clinical Applications 9 (3-4), 307-321, 2015 | 236 | 2015 |
| Quantitative measurements of N‐linked glycoproteins in human plasma by SWATH‐MS Y Liu, R Hüttenhain, S Surinova, LCJ Gillet, J Mouritsen, R Brunner, ... Proteomics 13 (8), 1247-1256, 2013 | 231 | 2013 |
| Statistical control of peptide and protein error rates in large-scale targeted data-independent acquisition analyses G Rosenberger, I Bludau, U Schmitt, M Heusel, CL Hunter, Y Liu, ... Nature methods 14 (9), 921-927, 2017 | 225 | 2017 |
| Glycoproteomic analysis of prostate cancer tissues by SWATH mass spectrometry discovers N-acylethanolamine acid amidase and protein tyrosine kinase 7 as signatures for tumor … Y Liu, J Chen, A Sethi, QK Li, L Chen, B Collins, LCJ Gillet, B Wollscheid, ... Molecular & Cellular Proteomics 13 (7), 1753-1768, 2014 | 217 | 2014 |
| A class of environmental and endogenous toxins induces BRCA2 haploinsufficiency and genome instability SLW Tan, S Chadha, Y Liu, E Gabasova, D Perera, K Ahmed, ... Cell 169 (6), 1105-1118. e15, 2017 | 208 | 2017 |
| Impact of alternative splicing on the human proteome Y Liu, M Gonzàlez-Porta, S Santos, A Brazma, JC Marioni, R Aebersold, ... Cell reports 20 (5), 1229-1241, 2017 | 199 | 2017 |
| TRIC: an automated alignment strategy for reproducible protein quantification in targeted proteomics HL Röst, Y Liu, G D'Agostino, M Zanella, P Navarro, G Rosenberger, ... Nature methods 13 (9), 777-783, 2016 | 191 | 2016 |
| Mass spectrometric protein maps for biomarker discovery and clinical research Y Liu, R Hüttenhain, B Collins, R Aebersold Expert review of molecular diagnostics 13 (8), 811-825, 2013 | 158 | 2013 |
| Inference and quantification of peptidoforms in large sample cohorts by SWATH-MS G Rosenberger, Y Liu, HL Röst, C Ludwig, A Buil, A Bensimon, M Soste, ... Nature biotechnology 35 (8), 781-788, 2017 | 139 | 2017 |
| Systematic proteome and proteostasis profiling in human Trisomy 21 fibroblast cells Y Liu, C Borel, L Li, T Müller, EG Williams, PL Germain, M Buljan, T Sajic, ... Nature communications 8 (1), 1212, 2017 | 138 | 2017 |
| Strategies to enable large-scale proteomics for reproducible research RC Poulos, PG Hains, R Shah, N Lucas, D Xavier, SS Manda, A Anees, ... Nature communications 11 (1), 3793, 2020 | 117 | 2020 |
| Prediction of colorectal cancer diagnosis based on circulating plasma proteins S Surinova, M Choi, S Tao, PJ Schüffler, CY Chang, T Clough, K Vysloužil, ... EMBO molecular medicine 7 (9), 1166-1178, 2015 | 108 | 2015 |
| NAguideR: performing and prioritizing missing value imputations for consistent bottom-up proteomic analyses S Wang, W Li, L Hu, J Cheng, H Yang, Y Liu Nucleic acids research 48 (14), e83-e83, 2020 | 107 | 2020 |
Ben CollinsProfessor of Proteomics and Chemical Biology, Queen's University BelfastAdresse e-mail validée de qub.ac.uk