Michael B. Stadler

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Coauteurs

Dirk SchübelerDirector, Friedrich Miescher Institute for Biomedical Research, Basel, SwitzerlandAdresse e-mail validée de fmi.ch
Lukas BurgerResearch Associate, Friedrich Miescher Institute for Biomedical ResearchAdresse e-mail validée de fmi.ch
Antoine Hendrik Felix Marie PetersFriedrich Miescher Institute for Biomedical ResearchAdresse e-mail validée de fmi.ch
Christian BeiselHead Genomics Facility Basel, ETH ZurichAdresse e-mail validée de bsse.ethz.ch
Erik van NimwegenProfessor of computational systems biology, Biozentrum, University of BaselAdresse e-mail validée de unibas.ch
rabih murrAssistant Professor, University of GenevaAdresse e-mail validée de unige.ch
Vijay TiwariQueen’s University, UKAdresse e-mail validée de qub.ac.uk
Constance L CepkoProfessor of Genetics and Opthalmology, Harvard Medical School, Investigator of HHMIAdresse e-mail validée de genetics.med.harvard.edu
Michael Rebhan, Ph.D.NIBR Basel, Novartis (R&D)Adresse e-mail validée de novartis.com
Robert IvanekHead of Bioinformatics at the Department of Biomedicine, University of BaselAdresse e-mail validée de unibas.ch
Ilya LukoninHCS specialist, Friedrich Miescher Institute for Biomedical ResearchAdresse e-mail validée de fmi.ch
Jeff TrimarchiLehigh UniversityAdresse e-mail validée de lehigh.edu
Prisca LiberaliFriedrich Miescher Institute for Biomedical Research (FMI), ETH D-BSSEAdresse e-mail validée de fmi.ch
Volker BusskampUniversity of Bonn - Dep. of OphthalmologyAdresse e-mail validée de uni-bonn.de
Panagiotis PapasaikasFriedrich Miescher Institute (FMI)Adresse e-mail validée de fmi.ch
Anita LerchUniversity of Notre DameAdresse e-mail validée de nd.edu
Daniela TavernaDept. Mol. Biotech. and Health SciencesAdresse e-mail validée de unito.it
Jeremy L. JenkinsUS Head Discovery Sciences, Novartis BioMedical ResearchAdresse e-mail validée de novartis.com
Fabio MohnStaff scientist, FMI Basel, SwitzerlandAdresse e-mail validée de fmi.ch
Eric S FischerProfessor of Biological Chemistry and Molecular Pharmacology, Harvard Medical SchoolAdresse e-mail validée de crystal.harvard.edu

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Michael B. Stadler

Head of Computational Biology, Friedrich Miescher Institute for Biomedical Research, Switzerland

Adresse e-mail validée de fmi.ch - Page d'accueil

Genomics Epigenetics DNA methylation Single cell analysis


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Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome M Weber, I Hellmann, MB Stadler, L Ramos, S Pääbo, M Rebhan, ... Nature genetics 39 (4), 457-466, 2007	2663	2007
DNA-binding factors shape the mouse methylome at distal regulatory regions MB Stadler, R Murr, L Burger, R Ivanek, F Lienert, A Schöler, E Nimwegen, ... Nature 480 (7378), 490-495, 2011	1534	2011
Encoding of conditioned fear in central amygdala inhibitory circuits S Ciocchi, C Herry, F Grenier, SBE Wolff, JJ Letzkus, I Vlachos, I Ehrlich, ... Nature 468 (7321), 277-282, 2010	1128	2010
Lineage-specific polycomb targets and de novo DNA methylation define restriction and potential of neuronal progenitors F Mohn, M Weber, M Rebhan, TC Roloff, J Richter, MB Stadler, M Bibel, ... Molecular cell 30 (6), 755-766, 2008	1118	2008
Structure of the DDB1–CRBN E3 ubiquitin ligase in complex with thalidomide ES Fischer, K Böhm, JR Lydeard, H Yang, MB Stadler, S Cavadini, ... Nature 512 (7512), 49-53, 2014	1079	2014
An immune atlas of clear cell renal cell carcinoma S Chevrier, JH Levine, VRT Zanotelli, K Silina, D Schulz, M Bacac, ... Cell 169 (4), 736-749. e18, 2017	966	2017
Repressive and active histone methylation mark distinct promoters in human and mouse spermatozoa U Brykczynska, M Hisano, S Erkek, L Ramos, EJ Oakeley, TC Roloff, ... Nature structural & molecular biology 17 (6), 679-687, 2010	764	2010
Characterizing light-regulated retinal microRNAs reveals rapid turnover as a common property of neuronal microRNAs J Krol, V Busskamp, I Markiewicz, MB Stadler, S Ribi, J Richter, J Duebel, ... Cell 141 (4), 618-631, 2010	592	2010
Self-organization and symmetry breaking in intestinal organoid development D Serra, U Mayr, A Boni, I Lukonin, M Rempfler, L Challet Meylan, ... Nature 569 (7754), 66-72, 2019	509	2019
Cell types of the human retina and its organoids at single-cell resolution CS Cowan, M Renner, M De Gennaro, B Gross-Scherf, D Goldblum, ... Cell 182 (6), 1623-1640. e34, 2020	503	2020
The transcriptome of retinal Müller glial cells K Roesch, AP Jadhav, JM Trimarchi, MB Stadler, B Roska, BB Sun, ... Journal of Comparative Neurology 509 (2), 225-238, 2008	452	2008
Polycomb group proteins Ezh2 and Rnf2 direct genomic contraction and imprinted repression in early mouse embryos R Terranova, S Yokobayashi, MB Stadler, AP Otte, M van Lohuizen, ... Developmental cell 15 (5), 668-679, 2008	379	2008
Molecular determinants of nucleosome retention at CpG-rich sequences in mouse spermatozoa S Erkek, M Hisano, CY Liang, M Gill, R Murr, J Dieker, D Schübeler, ... Nature structural & molecular biology 20 (7), 868-875, 2013	377	2013
PIK3CA^H1047R induces multipotency and multi-lineage mammary tumours S Koren, L Reavie, JP Couto, D De Silva, MB Stadler, T Roloff, A Britschgi, ... Nature 525 (7567), 114-118, 2015	339	2015
QuasR: quantification and annotation of short reads in R D Gaidatzis, A Lerch, F Hahne, MB Stadler Bioinformatics 31 (7), 1130-1132, 2015	320	2015
Analysis of intronic and exonic reads in RNA-seq data characterizes transcriptional and post-transcriptional regulation D Gaidatzis, L Burger, M Florescu, MB Stadler Nature biotechnology 33 (7), 722-729, 2015	318	2015
Tyrosine phosphatase SHP2 promotes breast cancer progression and maintains tumor-initiating cells via activation of key transcription factors and a positive feedback signaling loop N Aceto, N Sausgruber, H Brinkhaus, D Gaidatzis, G Martiny-Baron, ... Nature medicine 18 (4), 529-537, 2012	313	2012
microRNA‐214 contributes to melanoma tumour progression through suppression of TFAP2C E Penna, F Orso, D Cimino, E Tenaglia, A Lembo, E Quaglino, L Poliseno, ... The EMBO journal 30 (10), 1990-2007, 2011	313	2011
Transcriptional code and disease map for adult retinal cell types S Siegert, E Cabuy, BG Scherf, H Kohler, S Panda, YZ Le, HJ Fehling, ... Nature neuroscience 15 (3), 487-495, 2012	289	2012
Allergenicity prediction by protein sequence MB Stadler, BM Stadler The FASEB Journal 17 (9), 1141-1143, 2003	270	2003

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