GENCODE reference annotation for the human and mouse genomes A Frankish, M Diekhans, AM Ferreira, R Johnson, I Jungreis, J Loveland, ... Nucleic acids research 47 (D1), D766-D773, 2019 | 2965 | 2019 |
Pan-cancer analysis of whole genomes Nature 578 (7793), 82-93, 2020 | 2047* | 2020 |
Expanded encyclopaedias of DNA elements in the human and mouse genomes JE Moore, MJ Purcaro, HE Pratt, CB Epstein, N Shoresh, J Adrian, T Kawli, ... Nature 583 (7818), 699-710, 2020 | 1524 | 2020 |
Transcriptome-wide isoform-level dysregulation in ASD, schizophrenia, and bipolar disorder MJ Gandal, P Zhang, E Hadjimichael, RL Walker, C Chen, S Liu, H Won, ... Science 362 (6420), eaat8127, 2018 | 1162 | 2018 |
GENCODE 2021 A Frankish, M Diekhans, I Jungreis, J Lagarde, JE Loveland, JM Mudge, ... Nucleic acids research 49 (D1), D916-D923, 2021 | 1075 | 2021 |
Comprehensive functional genomic resource and integrative model for the human brain D Wang, S Liu, J Warrell, H Won, X Shi, FCP Navarro, D Clarke, M Gu, ... Science 362 (6420), eaat8464, 2018 | 935 | 2018 |
Multi-platform discovery of haplotype-resolved structural variation in human genomes MJP Chaisson, AD Sanders, X Zhao, A Malhotra, D Porubsky, T Rausch, ... Nature communications 10 (1), 1784, 2019 | 846 | 2019 |
Integrative functional genomic analysis of human brain development and neuropsychiatric risks M Li, G Santpere, Y Imamura Kawasawa, OV Evgrafov, FO Gulden, ... Science 362 (6420), eaat7615, 2018 | 726 | 2018 |
Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing I Cortés-Ciriano, JJK Lee, R Xi, D Jain, YL Jung, L Yang, D Gordenin, ... Nature genetics 52 (3), 331-341, 2020 | 644 | 2020 |
Pan-cancer analysis of whole genomes identifies driver rearrangements promoted by LINE-1 retrotransposition B Rodriguez-Martin, EG Alvarez, A Baez-Ortega, J Zamora, F Supek, ... Nature genetics 52 (3), 306-319, 2020 | 386 | 2020 |
The psychencode project S Akbarian, C Liu, JA Knowles, FM Vaccarino, PJ Farnham, GE Crawford, ... Nature neuroscience 18 (12), 1707-1712, 2015 | 368 | 2015 |
Transcriptome and epigenome landscape of human cortical development modeled in organoids A Amiri, G Coppola, S Scuderi, F Wu, T Roychowdhury, F Liu, ... Science 362 (6420), eaat6720, 2018 | 295 | 2018 |
Diverse human extracellular RNAs are widely detected in human plasma JE Freedman, M Gerstein, E Mick, J Rozowsky, D Levy, R Kitchen, S Das, ... Nature communications 7 (1), 11106, 2016 | 241 | 2016 |
Sixteen diverse laboratory mouse reference genomes define strain-specific haplotypes and novel functional loci J Lilue, AG Doran, IT Fiddes, M Abrudan, J Armstrong, R Bennett, ... Nature genetics 50 (11), 1574-1583, 2018 | 229 | 2018 |
Gene copy-number polymorphism caused by retrotransposition in humans DR Schrider, FCP Navarro, PAF Galante, RB Parmigiani, AA Camargo, ... PLoS genetics 9 (1), e1003242, 2013 | 120 | 2013 |
Human-specific tandem repeat expansion and differential gene expression during primate evolution A Sulovari, R Li, PA Audano, D Porubsky, MR Vollger, GA Logsdon, ... Proceedings of the National Academy of Sciences 116 (46), 23243-23253, 2019 | 108 | 2019 |
Repeat associated mechanisms of genome evolution and function revealed by the Mus caroli and Mus pahari genomes D Thybert, M Roller, FCP Navarro, I Fiddes, I Streeter, C Feig, ... Genome research 28 (4), 448-459, 2018 | 101 | 2018 |
Genomics and data science: an application within an umbrella FCP Navarro, H Mohsen, C Yan, S Li, M Gu, W Meyerson, M Gerstein Genome biology 20, 1-11, 2019 | 84 | 2019 |
Mutational analysis of genes coding for cell surface proteins in colorectal cancer cell lines reveal novel altered pathways, druggable mutations and mutated epitopes for … E Donnard, PF Asprino, BR Correa, F Bettoni, FC Koyama, FCP Navarro, ... Oncotarget 5 (19), 9199, 2014 | 74 | 2014 |
FusorSV: an algorithm for optimally combining data from multiple structural variation detection methods T Becker, WP Lee, J Leone, Q Zhu, C Zhang, S Liu, J Sargent, K Shanker, ... Genome biology 19, 1-14, 2018 | 63 | 2018 |