Tjaart de Beer

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Gerardo TaurielloBiozentrum University of Basel - SIB Swiss Institute of BioinformaticsAdresse e-mail validée de unibas.ch
Torsten SchwedeUniversity of Basel, Biozentrum & SIB Swiss Institute of BioinformaticsAdresse e-mail validée de unibas.ch
Rafal GumiennyUniversity of Basel, BiozentrumAdresse e-mail validée de unibas.ch
Martino BertoniInstitute for Research in BiomedicineAdresse e-mail validée de irbbarcelona.org
Rosalba LeporeUniversity of BaselAdresse e-mail validée de unibas.ch
Janet M ThorntonSenior Scientist, European Molecular Biology Laboratory - European Institute of Bioinformatics (EMBLAdresse e-mail validée de ebi.ac.uk
Roman A LaskowskiEuropean Bioinformatics Institute (EBI)Adresse e-mail validée de ebi.ac.uk
Francois Frederick MareeAgricultural Research CouncilAdresse e-mail validée de arc.agric.za
Fourie JoubertUniversity of PretoriaAdresse e-mail validée de up.ac.za
Hester G. O'NeillDepartment of Microbial, Biochemical and Food Biotechnology, University of the Free StateAdresse e-mail validée de ufs.ac.za
Nicholas FurnhamLondon School of Hygiene and Tropical MedicineAdresse e-mail validée de cryst.bioc.cam.ac.uk
Karel BerkaPalacký University OlomoucAdresse e-mail validée de upol.cz
Braam LouwProfessor of Biochemistry, University of PretoriaAdresse e-mail validée de up.ac.za
Gemma L. HollidayAstraZenecaAdresse e-mail validée de astrazeneca.com
William PearsonU. of VirginiaAdresse e-mail validée de virginia.edu
Richard ReeveProfessor, SBOHVM, University of GlasgowAdresse e-mail validée de glasgow.ac.uk
Daniel HaydonProfessor of Population Ecology and Epidemiology, SBOHVM, University of GlasgowAdresse e-mail validée de glasgow.ac.uk
Nick GoldmanEMBL-European Bioinformatics InstituteAdresse e-mail validée de ebi.ac.uk
Sarah ParksRAND EuropeAdresse e-mail validée de rand.org
A. ShonhaiProfessor of Biochemistry, University of VendaAdresse e-mail validée de univen.ac.za

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Tjaart de Beer

F. Hoffman-La Roche Ltd

Adresse e-mail validée de roche.com

Computational Biology Structural biology bioinformatics structural bioinformatics digital biomarkers


Titre Trier par citations Trier par année Trier par titre	Citée par Citée par	Année
SWISS-MODEL: homology modelling of protein structures and complexes A Waterhouse, M Bertoni, S Bienert, G Studer, G Tauriello, R Gumienny, ... Nucleic acids research 46 (W1), W296-W303, 2018	11499	2018
The SWISS-MODEL Repository—new features and functionality S Bienert, A Waterhouse, TAP De Beer, G Tauriello, G Studer, L Bordoli, ... Nucleic acids research 45 (D1), D313-D319, 2017	1808	2017
PDBsum additions TAP De Beer, K Berka, JM Thornton, RA Laskowski Nucleic acids research 42 (D1), D292-D296, 2014	385	2014
The Catalytic Site Atlas 2.0: cataloging catalytic sites and residues identified in enzymes N Furnham, GL Holliday, TAP de Beer, JOB Jacobsen, WR Pearson, ... Nucleic acids research 42 (D1), D485-D489, 2014	211	2014
Sequence-based prediction for vaccine strain selection and identification of antigenic variability in foot-and-mouth disease virus R Reeve, B Blignaut, JJ Esterhuysen, P Opperman, L Matthews, EE Fry, ... PLoS computational biology 6 (12), e1001027, 2010	88	2010
Amino acid changes in disease-associated variants differ radically from variants observed in the 1000 genomes project dataset TAP de Beer, RA Laskowski, SL Parks, B Sipos, N Goldman, JM Thornton PLoS computational biology 9 (12), e1003382, 2013	79	2013
Structure-function study of a Plasmodium falciparum Hsp70 using three dimensional modelling and in vitro analyses A Shonhai, M Botha, TAP de Beer, A Boshoff, GL Blatch Protein and peptide letters 15 (10), 1117-1125, 2008	66	2008
SWISS-MODEL: Homology modelling of protein structures and complexes., 2018, 46, pp A Waterhouse, M Bertoni, S Bienert, G Studer, G Tauriello, R Gumienny, ... W296-W303. DOI: https://doi. org/10.1093/nar/gky427, 0	65
Predicting antigenic sites on the foot-and-mouth disease virus capsid of the South African Territories types using virus neutralization data FF Maree, B Blignaut, JJ Esterhuysen, TAP De Beer, J Theron, HG O’neill, ... Journal of General Virology 92 (10), 2297-2309, 2011	63	2011
Mapping of amino acid residues responsible for adhesion of cell culture-adapted foot-and-mouth disease SAT type viruses FF Maree, B Blignaut, TAP De Beer, N Visser, EA Rieder Virus research 153 (1), 82-91, 2010	53	2010
The SIB Swiss Institute of Bioinformatics’ resources: focus on curated databases SIB Swiss Institute of Bioinformatics Members Nucleic acids research 44 (D1), D27-D37, 2016	52	2016
Strømme Syndrome Is a Ciliary Disorder Caused by Mutations in CENPF I Filges, E Bruder, K Brandal, S Meier, DE Undlien, TR Waage, I Hoesli, ... Human mutation 37 (4), 359-363, 2016	47	2016
Antimalarial drug discovery: in silico structural biology and rational drug design TAP De Beer, GA Wells, PB Burger, F Joubert, E Marechal, L Birkholtz, ... Infectious Disorders-Drug Targets (Formerly Current Drug Targets-Infectious …, 2009	44	2009
Protein homology modelling and its use in South Africa: research in action AO Tastan Bishop, TAP De Beer, F Joubert South African Journal of Science 104 (1), 2-6, 2008	44	2008
Elucidation of sulfadoxine resistance with structural models of the bifunctional Plasmodium falciparum dihydropterin pyrophosphokinase–dihydropteroate synthase TAP de Beer, AI Louw, F Joubert Bioorganic & medicinal chemistry 14 (13), 4433-4443, 2006	35	2006
Analysis of SAT type foot-and-mouth disease virus capsid proteins and the identification of putative amino acid residues affecting virus stability FF Maree, B Blignaut, TAP de Beer, E Rieder PLoS One 8 (5), e61612, 2013	32	2013
Common sequence variants affect molecular function more than rare variants? Y Mahlich, J Reeb, M Hecht, M Schelling, TAP De Beer, Y Bromberg, ... Scientific reports 7 (1), 1608, 2017	26	2017
Synthesis of empty African horse sickness virus particles S Maree, FF Maree, JF Putterill, TAP De Beer, H Huismans, J Theron Virus research 213, 184-194, 2016	26	2016
Current challenges in genome annotation through structural biology and bioinformatics N Furnham, TAP de Beer, JM Thornton Current opinion in structural biology 22 (5), 594-601, 2012	26	2012
The malarial drug target Plasmodium falciparum 1-deoxy-d-xylulose-5-phosphate reductoisomerase (PfDXR): development of a 3-D model for identification of novel, structural and … JL Goble, MR Adendorff, TAP de Beer, LL Stephens, GL Blatch Protein and Peptide Letters 17 (1), 109-120, 2010	26	2010

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