| Lipid Data Analyzer: unattended identification and quantitation of lipids in LC-MS data J Hartler, M Trötzmüller, C Chitraju, F Spener, HC Köfeler, GG Thallinger Bioinformatics 27 (4), 572-577, 2011 | 211 | 2011 |
| PathwayExplorer: web service for visualizing high-throughput expression data on biological pathways B Mlecnik, M Scheideler, H Hackl, J Hartler, F Sanchez-Cabo, ... Nucleic acids research 33 (suppl_2), W633-W637, 2005 | 160 | 2005 |
| Deciphering lipid structures based on platform-independent decision rules J Hartler, A Triebl, A Ziegl, M Trötzmüller, GN Rechberger, OA Zeleznik, ... Nature methods 14 (12), 1171-1174, 2017 | 155 | 2017 |
| The mzTab data exchange format: communicating mass-spectrometry-based proteomics and metabolomics experimental results to a wider audience J Griss, AR Jones, T Sachsenberg, M Walzer, L Gatto, J Hartler, ... Molecular & Cellular Proteomics 13 (10), 2765-2775, 2014 | 155 | 2014 |
| A comprehensive method for lipid profiling by liquid chromatography-ion cyclotron resonance mass spectrometry A Fauland, H Köfeler, M Trötzmüller, A Knopf, J Hartler, A Eberl, ... Journal of lipid research 52 (12), 2314-2322, 2011 | 152 | 2011 |
| Proposal for a common nomenclature for fragment ions in mass spectra of lipids JK Pauling, M Hermansson, J Hartler, K Christiansen, SF Gallego, B Peng, ... PLoS One 12 (11), e0188394, 2017 | 120 | 2017 |
| Lipidomics by ultrahigh performance liquid chromatography-high resolution mass spectrometry and its application to complex biological samples A Triebl, M Trötzmüller, J Hartler, T Stojakovic, HC Köfeler Journal of Chromatography B 1053, 72-80, 2017 | 119 | 2017 |
| Lipidomic analysis of lipid droplets from murine hepatocytes reveals distinct signatures for nutritional stress C Chitraju, M Trötzmüller, J Hartler, H Wolinski, GG Thallinger, A Lass, ... Journal of lipid research 53 (10), 2141-2152, 2012 | 111 | 2012 |
| MARS: microarray analysis, retrieval, and storage system M Maurer, R Molidor, A Sturn, J Hartler, H Hackl, G Stocker, A Prokesch, ... BMC bioinformatics 6, 1-12, 2005 | 84 | 2005 |
| Quality control requirements for the correct annotation of lipidomics data HC Köfeler, TO Eichmann, R Ahrends, JA Bowden, N Danne-Rasche, ... Nature communications 12 (1), 4771, 2021 | 80 | 2021 |
| Quantitation of phosphatidic acid and lysophosphatidic acid molecular species using hydrophilic interaction liquid chromatography coupled to electrospray ionization high … A Triebl, M Trötzmüller, A Eberl, P Hanel, J Hartler, HC Köfeler Journal of chromatography A 1347, 104-110, 2014 | 73 | 2014 |
| Introducing the lipidomics minimal reporting checklist JG McDonald, CS Ejsing, D Kopczynski, M Holčapek, J Aoki, M Arita, ... Nature metabolism 4 (9), 1086-1088, 2022 | 67 | 2022 |
| Nonalcoholic fatty liver disease stratification by liver lipidomics O Vvedenskaya, TD Rose, O Knittelfelder, A Palladini, JAH Wodke, ... Journal of lipid research 62, 2021 | 66 | 2021 |
| mzTab-M: a data standard for sharing quantitative results in mass spectrometry metabolomics N Hoffmann, J Rein, T Sachsenberg, J Hartler, K Haug, G Mayer, O Alka, ... Analytical chemistry 91 (5), 3302-3310, 2019 | 60 | 2019 |
| Lipidomics: prospects from a technological perspective A Triebl, J Hartler, M Trötzmüller, HC Köfeler Biochimica Et Biophysica Acta (BBA)-Molecular and Cell Biology of Lipids …, 2017 | 59 | 2017 |
| MASPECTRAS: a platform for management and analysis of proteomics LC-MS/MS data J Hartler, GG Thallinger, G Stocker, A Sturn, TR Burkard, E Körner, ... BMC bioinformatics 8, 1-13, 2007 | 56 | 2007 |
| Guiding the choice of informatics software and tools for lipidomics research applications Z Ni, M Wölk, G Jukes, K Mendivelso Espinosa, R Ahrends, L Aimo, ... Nature methods 20 (2), 193-204, 2023 | 51 | 2023 |
| Bioinformatics tools and challenges in structural analysis of lipidomics MS/MS data J Hartler, R Tharakan, HC Köfeler, DR Graham, GG Thallinger Briefings in bioinformatics 14 (3), 375-390, 2013 | 49 | 2013 |
| ATGL and CGI-58 are lipid droplet proteins of the hepatic stellate cell line HSC-T6 TO Eichmann, L Grumet, U Taschler, J Hartler, C Heier, A Woblistin, ... Journal of lipid research 56 (10), 1972-1984, 2015 | 43 | 2015 |
| Automated Annotation of Sphingolipids Including Accurate Identification of Hydroxylation Sites Using MSn Data J Hartler, AM Armando, M Trötzmüller, EA Dennis, HC Köfeler, ... Analytical chemistry 92 (20), 14054-14062, 2020 | 40 | 2020 |
