Ana Sofia Fernandes Oliveira

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Adrian MulhollandProfessor of Chemistry, University of BristolAdresse e-mail validée de bristol.ac.uk
Claudio M SoaresFull Professor, ITQB NOVA, Instituto de Tecnologia Química e Biológica António Xavier, UniversidadeAdresse e-mail validée de itqb.unl.pt
António M. BaptistaPrincipal Investigator, ITQB NOVA, Instituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de LisboaAdresse e-mail validée de itqb.unl.pt
Christiane SchaffitzelProfessor of Biochemistry, Bristol UniversityAdresse e-mail validée de bristol.ac.uk
Imre BergerDirector Max Planck Bristol Centre; FMedSci; Professor of Biochemistry and ChemistryAdresse e-mail validée de bristol.ac.uk
Rommie E. AmaroDistinguished Professorship in Theoretical and Computational Chemistry, UC San Diego.Adresse e-mail validée de ucsd.edu
Lorenzo CasalinoAssistant Project Scientist, University of California, San DiegoAdresse e-mail validée de ucsd.edu
Giovanni CiccottiDept of Physics, University of Rome "La Sapienza"Adresse e-mail validée de roma1.infn.it
Sara R. R. CamposInstituto de Tecnologia Química e Biológica António XavierAdresse e-mail validée de itqb.unl.pt
João M. DamasSyngenta Crop Protection R&DAdresse e-mail validée de syngenta.com
Inês A. C. PereiraITQB NOVA, Universidade Nova de LisboaAdresse e-mail validée de itqb.unl.pt
Miguel MachuqueiroAssistant Professor at Faculdade de Ciências, Universidade de LisboaAdresse e-mail validée de ciencias.ulisboa.pt
Tudor LuchianAlexandru I.Cuza UniversityAdresse e-mail validée de uaic.ro
Elisa Julião CamposUniversity of Coimbra - Centre for Chemical Engineering and Renewable Resources for SustainabilityAdresse e-mail validée de uc.pt
Colin McVeyITQB NOVA UNLAdresse e-mail validée de itqb.unl.pt
Cecilia BouzatAdresse e-mail validée de criba.edu.ar
Andrew DavidsonReader in Vriology, University of BristolAdresse e-mail validée de bristol.ac.uk

Suivre

Ana Sofia Fernandes Oliveira

School of Biochemistry & Center for Computational Chemistry, University of Bristol, UK

Adresse e-mail validée de bristol.ac.uk - Page d'accueil

Simulation membrane proteins


Titre Trier par citations Trier par année Trier par titre	Citée par Citée par	Année
Hydrogenases in Desulfovibrio vulgaris Hildenborough: structural and physiologic characterisation of the membrane-bound [NiFeSe] hydrogenase FMA Valente, ASF Oliveira, N Gnadt, I Pacheco, AV Coelho, AV Xavier, ... JBIC Journal of Biological Inorganic Chemistry 10, 667-682, 2005	115	2005
On the Use of Different Dielectric Constants for Computing Individual and Pairwise Terms in Poisson− Boltzmann Studies of Protein Ionization Equilibrium VH Teixeira, CA Cunha, M Machuqueiro, ASF Oliveira, BL Victor, ... The journal of physical chemistry B 109 (30), 14691-14706, 2005	113	2005
# COVIDisAirborne: AI-enabled multiscale computational microscopy of delta SARS-CoV-2 in a respiratory aerosol A Dommer, L Casalino, F Kearns, M Rosenfeld, N Wauer, SH Ahn, ... The international journal of high performance computing applications 37 (1 …, 2023	80	2023
Conformational changes induced by ATP‐hydrolysis in an ABC transporter: A molecular dynamics study of the Sav1866 exporter AS Oliveira, AM Baptista, CM Soares Proteins: Structure, Function, and Bioinformatics 79 (6), 1977-1990, 2011	77	2011
Structural consequences of ATP hydrolysis on the ABC transporter NBD dimer: molecular dynamics studies of HlyB JM Damas, ASF Oliveira, AM Baptista, CM Soares Protein Science 20 (7), 1220-1230, 2011	66	2011
Allosteric communication in class A β-lactamases occurs via cooperative coupling of loop dynamics I Galdadas, S Qu, Oliveira, ASF, E Olehnovics, AR Mack, MF Mojica, ... eLife 1, 2021	59	2021
A potential interaction between the SARS-CoV-2 spike protein and nicotinic acetylcholine receptors ASF Oliveira, AA Ibarra, I Bermudez, L Casalino, Z Gaieb, DK Shoemark, ... Biophys Journal 120, 983–993, 2021	49	2021
Molecular dynamics simulations support the hypothesis that the brGDGT paleothermometer is based on homeoviscous adaptation BDA Naafs, ASF Oliveira, AJ Mulholland Geochimica et Cosmochimica Acta 312, 44-56, 2021	47	2021
Unlocking Nicotinic Selectivity via Direct C‒H Functionalization of (−)-Cytisine HR Campello, SG Del Villar, A Honraedt, T Minguez, ASF Oliveira, ... Chem, inpress, 2018	41	2018
Insights into the molecular mechanism of an ABC transporter: conformational changes in the NBD dimer of MJ0796 ASF Oliveira, AM Baptista, CM Soares The Journal of Physical Chemistry B 114 (16), 5486-5496, 2010	40	2010
Inter-domain Communication Mechanisms in an ABC Importer: A Molecular Dynamics Study of the MalFGK₂E Complex ASF Oliveira, AM Baptista, CM Soares PLoS computational biology 7 (8), e1002128, 2011	39	2011
A general mechanism for signal propagation in the nicotinic acetylcholine receptor family ASF Oliveira, CJ Edsall, CJ Woods, P Bates, GV Nunez, S Wonnacott, ... Journal of the American Chemical Society 141 (51), 19953-19958, 2019	31	2019
Structural and Functional insights into the catalytic mechanism of the Type II NADH:quinone oxidoreductase family BC Marreiros, FV Sena, FM Sousa, ASF Oliveira, CM Soares, AP Batista, ... Scientific Reports 7 (42303), 1-13, 2017	31	2017
Structural insights in cell-type specific evolution of intra-host diversity by SARS-CoV-2 K Gupta, C Toelzer, MK Williamson, DK Shoemark, ASF Oliveira, ... Nature communications 13 (1), 222, 2022	28	2022
Identification of the Initial Steps in Signal Transduction in the α4β2 Nicotinic Receptor: Insights from Equilibrium and Nonequilibrium Simulations ASF Oliveira, DK Shoemark, HR Campello, S Wonnacott, T Gallagher, ... Structure 27 (7), 1171-1183.e3, 2019	28	2019
“The key role of glutamate 172 in the mechanism of type II NADH:quinone oxidoreductase of Staphylococcus aureus FV Sousa FM1, Sena, AP Batista, D Athayde, JA Brito, M Archer, ... BBA-Bioenergetics. 1858, 823-832, 2017	28*	2017
Dynamical nonequilibrium molecular dynamics reveals the structural basis for allostery and signal propagation in biomolecular systems ASF Oliveira, G Ciccotti, S Haider, AJ Mulholland The European Physical Journal B 94, 1-12, 2021	27	2021
F.; Victor, BL; Soares, CM; Baptista, AM On the Use of Different Dielectric Constants for Computing Individual and Pairwise Terms in Poisson-Boltzmann Studies of Protein … VH Teixeira, CA Cunha, M Machuqueiro, AS Oliveira J. Phys. Chem. B 109 (30), 14691-14706, 2005	27	2005
Simulations support the interaction of the SARS-CoV-2 spike protein with nicotinic acetylcholine receptors ASF Oliveira, AA Amaurys, I Bermudez, C Lorenzo, G Zied, DK Shoemark, ... bioRxiv, 2020	26	2020
Exploring O₂ Diffusion in A-Type Cytochrome c Oxidases: Molecular Dynamics Simulations Uncover Two Alternative Channels towards the Binuclear Site ASF Oliveira, JM Damas, AM Baptista, CM Soares PLoS computational biology 10 (12), e1004010, 2014	26	2014

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