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Vladimir Kaberdin
Vladimir Kaberdin
Ikerbasque Research Professor, University of the Basque Country
Adresse e-mail validée de ehu.eus - Page d'accueil
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Proteins associated with RNase E in a multicomponent ribonucleolytic complex.
A Miczak, VR Kaberdin, CL Wei, S Lin-Chao
Proceedings of the National Academy of Sciences 93 (9), 3865-3869, 1996
4561996
Coincident Hfq binding and RNase E cleavage sites on mRNA and small regulatory RNAs
I Moll, T Afonyushkin, O Vytvytska, VR Kaberdin, UDO Bläsi
Rna 9 (11), 1308-1314, 2003
3442003
Hfq (HF1) stimulates ompA mRNA decay by interfering with ribosome binding
O Vytvytska, I Moll, VR Kaberdin, A von Gabain, U Bläsi
Genes & development 14 (9), 1109-1118, 2000
2462000
Both RNase E and RNase III control the stability of sodB mRNA upon translational inhibition by the small regulatory RNA RyhB
T Afonyushkin, B Vecˇerek, I Moll, U Blasi, VR Kaberdin
Nucleic acids research 33 (5), 1678-1689, 2005
2242005
Site-specific RNase E cleavage of oligonucleotides and inhibition by stem–loops
KJ McDowall, VR Kaberdin, SW Wu, SN Cohen, S Lin-Chao
Nature 374 (6519), 287-290, 1995
1831995
Translation initiation and the fate of bacterial mRNAs
VR Kaberdin, U Bläsi
FEMS microbiology reviews 30 (6), 967-979, 2006
1752006
The endoribonucleolytic N-terminal half of Escherichia coli RNase E is evolutionarily conserved in Synechocystis sp. and other bacteria but not the C-terminal half …
VR Kaberdin, A Miczak, JS Jakobsen, S Lin-Chao, KJ McDowall, ...
Proceedings of the National Academy of Sciences 95 (20), 11637-11642, 1998
1681998
Interaction of the RNA chaperone Hfq with mRNAs: direct and indirect roles of Hfq in iron metabolism of Escherichia coli
B Večerek, I Moll, T Afonyushkin, V Kaberdin, U Bläsi
Molecular microbiology 50 (3), 897-909, 2003
1412003
Regulation of ribonuclease E activity by the L4 ribosomal protein of Escherichia coli
D Singh, SJ Chang, PH Lin, OV Averina, VR Kaberdin, S Lin-Chao
Proceedings of the National Academy of Sciences 106 (3), 864-869, 2009
1002009
Distinct and overlapping binding sites of Pseudomonas aeruginosa Hfq and RsmA proteins on the non-coding RNA RsmY
T Sorger-Domenigg, E Sonnleitner, VR Kaberdin, U Bläsi
Biochemical and biophysical research communications 352 (3), 769-773, 2007
892007
Probing the substrate specificity of Escherichia coli RNase E using a novel oligonucleotide‐based assay
VR Kaberdin
Nucleic acids research 31 (16), 4710-4716, 2003
872003
RNA components of Escherichia coli degradosome: Evidence for rRNA decay
DA Bessarab, VR Kaberdin, CL Wei, GG Liou, S Lin-Chao
Proceedings of the National Academy of Sciences 95 (6), 3157-3161, 1998
841998
Translational activation by the noncoding RNA DsrA involves alternative RNase III processing in the rpoS 5′-leader
A Resch, T Afonyushkin, TB Lombo, KJ McDowall, U Bläsi, VR Kaberdin
RNA 14 (3), 454-459, 2008
782008
Composition and conservation of the mRNA-degrading machinery in bacteria
VR Kaberdin, D Singh, S Lin-Chao
Journal of biomedical science 18, 1-12, 2011
702011
Vibrio harveyi: A brief survey of general characteristics and recent epidemiological traits associated with climate change
I Montánchez, VR Kaberdin
Marine environmental research 154, 104850, 2020
692020
Translation initiation factor a/eIF2 (-γ) counteracts 5′ to 3′ mRNA decay in the archaeon Sulfolobus solfataricus
D Hasenöhrl, T Lombo, V Kaberdin, P Londei, U Bläsi
Proceedings of the National Academy of Sciences 105 (6), 2146-2150, 2008
662008
Enhanced cleavage of RNA mediated by an interaction between substrates and the arginine-rich domain of E. coli ribonuclease E
VR Kaberdin, AP Walsh, T Jakobsen, KJ McDowall, A von Gabain
Journal of molecular biology 301 (2), 257-264, 2000
652000
Analysis of Vibrio harveyi adaptation in sea water microcosms at elevated temperature provides insights into the putative mechanisms of its persistence and spread …
I Montánchez, E Ogayar, AH Plágaro, A Esteve-Codina, J Gómez-Garrido, ...
Scientific Reports 9 (1), 289, 2019
622019
Determination of the catalytic parameters of the N-terminal half of Escherichia coli ribonuclease E and the identification of critical functional groups in RNA substrates
Y Redko, MR Tock, CJ Adams, VR Kaberdin, JA Grasby, KJ McDowall
Journal of Biological Chemistry 278 (45), 44001-44008, 2003
572003
RNA polyadenylation and its consequences in prokaryotes
E Hajnsdorf, VR Kaberdin
Philosophical Transactions of the Royal Society B: Biological Sciences 373 …, 2018
562018
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