| Large-scale identification of coevolution signals across homo-oligomeric protein interfaces by direct coupling analysis G Uguzzoni, S John Lovis, F Oteri, A Schug, H Szurmant, M Weigt Proceedings of the National Academy of Sciences 114 (13), E2662-E2671, 2017 | 120 | 2017 |
| Deterministic domain wall motion orthogonal to current flow due to spin orbit torque D Bhowmik, ME Nowakowski, L You, OJ Lee, D Keating, M Wong, J Bokor, ... Scientific reports 5 (1), 11823, 2015 | 98 | 2015 |
| Efficient generative modeling of protein sequences using simple autoregressive models J Trinquier, G Uguzzoni, A Pagnani, F Zamponi, M Weigt Nature communications 12 (1), 5800, 2021 | 84 | 2021 |
| Maximum-entropy models of sequenced immune repertoires predict antigen-antibody affinity L Asti, G Uguzzoni, P Marcatili, A Pagnani PLoS computational biology 12 (4), e1004870, 2016 | 44 | 2016 |
| Direct coevolutionary couplings reflect biophysical residue interactions in proteins A Coucke, G Uguzzoni, F Oteri, S Cocco, R Monasson, M Weigt The Journal of chemical physics 145 (17), 2016 | 34 | 2016 |
| Unsupervised inference of protein fitness landscape from deep mutational scan J Fernandez-de-Cossio-Diaz, G Uguzzoni, A Pagnani Molecular biology and evolution 38 (1), 318-328, 2021 | 31 | 2021 |
| Learning clinical networks from medical records based on information estimates in mixed-type data V Cabeli, L Verny, N Sella, G Uguzzoni, M Verny, H Isambert PLoS computational biology 16 (5), e1007866, 2020 | 30 | 2020 |
| Collective behaviours: from biochemical kinetics to electronic circuits E Agliari, A Barra, R Burioni, A Di Biasio, G Uguzzoni Scientific Reports 3 (1), 3458, 2013 | 27* | 2013 |
| MIIC online: a web server to reconstruct causal or non-causal networks from non-perturbative data N Sella, L Verny, G Uguzzoni, S Affeldt, H Isambert Bioinformatics 34 (13), 2311-2313, 2018 | 24 | 2018 |
| The true reinforced random walk with bias E Agliari, R Burioni, G Uguzzoni New Journal of Physics 14 (6), 063027, 2012 | 16 | 2012 |
| Analogue neural networks on correlated random graphs E Agliari, L Asti, A Barra, R Burioni, G Uguzzoni Journal of Physics A: Mathematical and Theoretical 45 (36), 365001, 2012 | 11 | 2012 |
| Reaction networks as systems for resource allocation: A variational principle for their non-equilibrium steady states A De Martino, D De Martino, R Mulet, G Uguzzoni PloS one 7 (7), e39849, 2012 | 10 | 2012 |
| Amala: Analysis of directed evolution experiments via annealed mutational approximated landscape L Sesta, G Uguzzoni, J Fernandez-de-Cossio-Diaz, A Pagnani International journal of molecular sciences 22 (20), 10908, 2021 | 9 | 2021 |
| Unsupervised modeling of mutational landscapes of adeno-associated viruses viability M De Leonardis, J Fernandez-de-Cossio-Diaz, G Uguzzoni, A Pagnani BMC bioinformatics 25 (1), 229, 2024 | 2 | 2024 |
| Inference of annealed protein fitness landscapes with AnnealDCA L Sesta, A Pagnani, J Fernandez-de-Cossio-Diaz, G Uguzzoni PLOS Computational Biology 20, 1-16, 2024 | 2 | 2024 |
| Inference and design of antibody specificity: from experiments to models and back J Fernandez-de-Cossio-Diaz, G Uguzzoni, K Ricard, F Anselmi, C Nizak, ... PLoS Computational Biology 20 (10), e1012522, 2024 | 1 | 2024 |
| Computer implemented method to optimize physical-chemical properties of biological sequences G Uguzzoni, A Pagnani, JFDEC DIA US Patent App. 17/620,768, 2022 | | 2022 |
| CORRIGENDUM: Collective behaviours: from biochemical kinetics to electronic circuits E Agliari, A Barra, R Burioni, A Di Biasio, G Uguzzoni Scientific Reports 3 (3458), 2013 | | 2013 |
| Reaction Networks as Systems for Resource Allocation: A Variational Principle for Their Non A De Martino, D De Martino, R Mulet, G Uguzzoni | | 2012 |
Andrea PagnaniProfessor at DISAT - Politecnico di Torino, and PI at the IIGMAdresse e-mail validée de polito.it
