Prashanth Athri

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W. David WilsonRegents’ ProfessorAdresse e-mail validée de gsu.edu
Gowri SrinivasaProfessor of Computer Science, PES University, BangaloreAdresse e-mail validée de pes.edu
Michael E. ZwickSenior Vice President for Research, Rutgers UniversityAdresse e-mail validée de rutgers.edu
Karyn Meltz SteinbergGeneDxAdresse e-mail validée de genedx.com
Amol Carl ShettyInstitute for Genome Sciences, University of MarylandAdresse e-mail validée de som.umaryland.edu
Ursula RothlisbergerProfessor of Computational Chemistry and BiochemistryAdresse e-mail validée de epfl.ch
Moritz GerstungDivision Head, German Cancer Research Centre DKFZAdresse e-mail validée de dkfz.de
Michael B. StadlerHead of Computational Biology, Friedrich Miescher Institute for Biomedical Research, SwitzerlandAdresse e-mail validée de fmi.ch
Christian BeiselHead Genomics Facility Basel, ETH ZurichAdresse e-mail validée de bsse.ethz.ch
David Téa OkouAdjunct Assistant Professor of PediatricsAdresse e-mail validée de emory.edu
Ivano TavernelliIBM Quantum, IBM Research - ZurichAdresse e-mail validée de zurich.ibm.com
Manuel DömerProgramme Director BSc. Data Science, ZHAW School of EngineeringAdresse e-mail validée de zhaw.ch
Elizabeth BrunkAssistant Professor at UNC Chapel HillAdresse e-mail validée de med.unc.edu
Adam E. LockeSenior Director, Statistical Genetics, Regeneron Genetics CenterAdresse e-mail validée de regeneron.com
SUSMITHA SHANKARBioinformatician, The Peter MacCallum Cancer CentreAdresse e-mail validée de petermac.org
Vanessa L. HornerUniversity of Wisconsin-MadisonAdresse e-mail validée de slh.wisc.edu
DAVID J CUTLEREmory UniversityAdresse e-mail validée de emory.edu
Kajari MondalAssociate Director, Fred Hutch Cancel CenterAdresse e-mail validée de fredhutch.org
Natalia MaltsevResearch Professor, Department of Human Genetics, The University of ChicagoAdresse e-mail validée de uchicago.edu
Stefan CanzarProfessor, University of RegensburgAdresse e-mail validée de ur.de

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Prashanth Athri

Regeneron Pharmaceuticals

Adresse e-mail validée de regeneron.com

AI in Life Sciences Computational Drug Discovery Bioinformatics Computational X-omics


Titre Trier par citations Trier par année Trier par titre	Citée par Citée par	Année
Polycomb preferentially targets stalled promoters of coding and non-coding transcripts D Enderle, C Beisel, MB Stadler, M Gerstung, A Prashanth, R Paro Genome Research 21 (2), 216-226, 2011	188	2011
Web-based drug repurposing tools: a survey PA E. Sam Briefings in Bioinformatics, 2017	63	2017
Combining Microarray-based Genomic Selection (MGS) with the Illumina Genome Analyzer Platform to Sequence Diploid Target Regions DT Okou, AE Locke, KM Steinberg, K Hagen, P Athri, AC Shetty, V Patel, ... Annals of Human Genetics 73 (5), 502-513, 2009	58	2009
Molecular Dynamics of Water-Mediated Interactions of a Linear Benzimidazole−Biphenyl Diamidine with the DNA Minor Groove P Athri, WD Wilson Journal of American Chemical Society 131 (22), 76, 2009	52	2009
3D QSAR on a library of heterocyclic diamidine derivatives with antiparasitic activity P Athri, T Wenzler, P Ruiz, R Brun, DW Boykin, R Tidwell, WD Wilson Bioorganic & Medicinal Chemistry 14 (9), 3144-3152, 2006	48	2006
SeqAnt: A web service to rapidly identify and annotate DNA sequence variations AC Shetty, P Athri, K Mondal, VL Horner, KM Steinberg, V Patel, ... BMC Bioinformatics 11 (471), 2010	47	2010
Exploring the functional impact of alternative splicing on human protein isoforms using available annotation sources D Sulakhe, M D’Souza, S Wang, S Balasubramanian, P Athri, B Xie, ... Briefings in bioinformatics 20 (5), 1754-1768, 2019	35	2019
Pushing the Frontiers of First-Principles Based Computer Simulations of Chemical and Biological Systems E Brunk, N Ashari, P Athri, P Campomanes, FF de Carvalho, ... Chimia 65 (9), 667-671, 2011	29	2011
Predicting adverse drug reactions of two‐drug combinations using structural and transcriptomic drug representations to train an artificial neural network S Shankar, I Bhandari, DT Okou, G Srinivasa, P Athri Chemical Biology & Drug Design 97 (3), 665-673, 2021	21	2021
Assessing the performance of computational methods for the prediction of the ground state structure of a cyclic decapeptide M Doemer, M Guglielmi, P Athri, NS Nagornova, TR Rizzo, OV Boyarkin, ... International Journal of Quantum Chemistry 113 (6), 808-814, 2012	20	2012
Pharmacophore model for pentamidine analogs active against Plasmodium falciparum P Athri, T Wenzler, R Tidwell, SM Bakunova, DW Wilson European Journal of Medicinal Chemistry 45 (12), 6147–6151, 2010	19	2010
Review of electrostatic force calculation methods and their acceleration in molecular dynamics packages using graphics processors A George, S Mondal, M Purnaprajna, P Athri ACS omega 7 (37), 32877-32896, 2022	11	2022
Genetic‐Algorithm‐Based Optimization of a Peptidic Scaffold for Sequestration and Hydration of CO₂ E Brunk, MAS Perez, P Athri, U Rothlisberger ChemPhysChem 17 (23), 3831-3835, 2016	9	2016
Predicting clinical trial outcomes using drug bioactivities through graph database integration and machine learning V Murali, YP Muralidhar, C Königs, M Nair, S Madhu, P Nedungadi, ... Chemical Biology & Drug Design 100 (2), 169-184, 2022	8	2022
Chembl bot-a chat bot for chembl database V Murali, RJ Sarma, PA Sukanya, P Athri 2018 Fourteenth International Conference on Information Processing (ICINPRO …, 2018	7	2018
Analysis of RNA-Seq data using self-supervised learning for vital status prediction of colorectal cancer patients G Padegal, MK Rao, OA Boggaram Ravishankar, S Acharya, P Athri, ... BMC bioinformatics 24 (1), 241, 2023	6	2023
CompoundDB4j: Integrated drug resource of heterogeneous chemical databases V Murali, C Königs, S Deekshitula, S Nukala, MD Santhi, P Athri Molecular informatics 39 (9), 2000013, 2020	5	2020
A machine learning understanding of sepsis M Shetty, SM Alex, M Moni, F Edathadathil, P Prasanna, V Menon, ... 2021 43rd Annual International Conference of the IEEE Engineering in …, 2021	3	2021
Computational prediction of potential vaccine candidates from tRNA encoded peptides (tREP) using a bioinformatic workflow and molecular dynamics validations PM Shanthappa, N Verma, A George, PK Dhar, P Athri IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2024	2	2024
Laplacian score and genetic algorithm based automatic feature selection for Markov State Models in adaptive sampling based molecular dynamics A George, M Purnaprajna, P Athri PeerJ Physical Chemistry 2, e9, 2020	2	2020

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