Non-coding RNAs and their integrated networks P Zhang, W Wu, Q Chen, M Chen Journal of integrative bioinformatics 16 (3), 20190027, 2019 | 635 | 2019 |
Circular RNA: an emerging key player in RNA world X Meng, X Li, P Zhang, J Wang, Y Zhou, M Chen Briefings in bioinformatics 18 (4), 547-557, 2017 | 328 | 2017 |
CircFunBase: a database for functional circular RNAs X Meng, D Hu, P Zhang, Q Chen, M Chen Database 2019, baz003, 2019 | 137 | 2019 |
CircPro: an integrated tool for the identification of circRNAs with protein-coding potential X Meng, Q Chen, P Zhang, M Chen Bioinformatics 33 (20), 3314-3316, 2017 | 104 | 2017 |
Construction of a cross-species cell landscape at single-cell level R Wang, P Zhang, J Wang, L Ma, W E, S Suo, M Jiang, J Li, H Chen, ... Nucleic acids research 51 (2), 501-516, 2023 | 88 | 2023 |
Tracing cell-type evolution by cross-species comparison of cell atlases J Wang, H Sun, M Jiang, J Li, P Zhang, H Chen, Y Mei, L Fei, S Lai, X Han, ... Cell Reports 34 (9), 2021 | 81 | 2021 |
PlantCircNet: a database for plant circRNA–miRNA–mRNA regulatory networks P Zhang, X Meng, H Chen, Y Liu, J Xue, Y Zhou, M Chen Database 2017, bax089, 2017 | 74 | 2017 |
Characterization and function of circular RNAs in plants P Zhang, S Li, M Chen Frontiers in Molecular Biosciences 7, 91, 2020 | 72 | 2020 |
Identification and characterization of ncRNA-associated ceRNA networks in Arabidopsis leaf development X Meng, P Zhang, Q Chen, J Wang, M Chen BMC genomics 19, 1-10, 2018 | 64 | 2018 |
ChIP-Hub provides an integrative platform for exploring plant regulome LY Fu, T Zhu, X Zhou, R Yu, Z He, P Zhang, Z Wu, M Chen, K Kaufmann, ... Nature Communications 13 (1), 3413, 2022 | 53 | 2022 |
Deep learning of cross-species single-cell landscapes identifies conserved regulatory programs underlying cell types J Li, J Wang, P Zhang, R Wang, Y Mei, Z Sun, L Fei, M Jiang, L Ma, W E, ... Nature Genetics 54 (11), 1711-1720, 2022 | 35 | 2022 |
Cell landscape of larval and adult Xenopus laevis at single-cell resolution Y Liao, L Ma, Q Guo, W E, X Fang, L Yang, F Ruan, J Wang, P Zhang, ... nature communications 13 (1), 4306, 2022 | 30 | 2022 |
PlncRNADB: a repository of plant lncRNAs and lncRNA-RBP protein interactions Y Bai, X Dai, T Ye, P Zhang, X Yan, X Gong, S Liang, M Chen Current Bioinformatics 14 (7), 621-627, 2019 | 28 | 2019 |
CircPlant: An integrated tool for CircRNA detection and functional prediction in plants P Zhang, Y Liu, H Chen, X Meng, J Xue, K Chen, M Chen Genomics, Proteomics and Bioinformatics 18 (3), 352-358, 2020 | 24 | 2020 |
Biogenesis, functions, interactions, and resources of non-coding RNAs in plants H Chao, Y Hu, L Zhao, S Xin, Q Ni, P Zhang, M Chen International Journal of Molecular Sciences 23 (7), 3695, 2022 | 22 | 2022 |
Construction of the axolotl cell landscape using combinatorial hybridization sequencing at single-cell resolution F Ye, G Zhang, W E, H Chen, C Yu, L Yang, Y Fu, J Li, S Fu, Z Sun, L Fei, ... Nature Communications 13 (1), 4228, 2022 | 14 | 2022 |
Computational Identification of miRNAs and Temperature-Responsive lncRNAs From Mango (Mangifera indica L.) NMM Moh, P Zhang, Y Chen, M Chen Frontiers in Genetics 12, 607248, 2021 | 10 | 2021 |
Rice LEAFY COTYLEDON1 hinders embryo greening during the seed development F Guo, P Zhang, Y Wu, G Lian, Z Yang, W Liu, B Buerte, C Zhou, W Zhang, ... Frontiers in Plant Science 13, 887980, 2022 | 9 | 2022 |
An analytical framework for decoding cell type-specific genetic variation of gene regulation Y Xiao, J Wang, J Li, P Zhang, J Li, Y Zhou, Q Zhou, M Chen, X Sheng, ... Nature Communications 14 (1), 3884, 2023 | 8 | 2023 |
Elucidating the developmental dynamics of mouse stromal cells at single-cell level X Fang, M Jiang, M Zhou, J Shao, X Fang, J Wang, Y Fu, Y Liao, H Chen, ... Life Medicine 1 (1), 45-48, 2022 | 8 | 2022 |