| The Kalanchoë genome provides insights into convergent evolution and building blocks of crassulacean acid metabolism X Yang, R Hu, H Yin, J Jenkins, S Shu, H Tang, D Liu, DA Weighill, ... Nature communications 8 (1), 1899, 2017 | 179 | 2017 |
| Transcript, protein and metabolite temporal dynamics in the CAM plant Agave PE Abraham, H Yin, AM Borland, D Weighill, SD Lim, HC De Paoli, ... Nature Plants 2 (12), 1-10, 2016 | 160 | 2016 |
| Early fermentation volatile metabolite profile of non-Saccharomyces yeasts in red and white grape must: A targeted approach MEB Whitener, S Carlin, D Jacobson, D Weighill, B Divol, L Conterno, ... LWT-Food Science and Technology 64 (1), 412-422, 2015 | 97 | 2015 |
| Proteomics and transcriptomics of the BABA-induced resistance response in potato using a novel functional annotation approach T Bengtsson, D Weighill, E Proux-Wéra, F Levander, S Resjö, DD Burra, ... BMC genomics 15, 1-19, 2014 | 90 | 2014 |
| GRAND: a database of gene regulatory network models across human conditions M Ben Guebila, CM Lopes-Ramos, D Weighill, AR Sonawane, R Burkholz, ... Nucleic Acids Research 50 (D1), D610-D621, 2022 | 73 | 2022 |
| Attacking the opioid epidemic: Determining the epistatic and pleiotropic genetic architectures for chronic pain and opioid addiction W Joubert, D Weighill, D Kainer, S Climer, A Justice, K Fagnan, ... SC18: International Conference for High Performance Computing, Networking …, 2018 | 68 | 2018 |
| Fungal-Bacterial Networks in the Populus Rhizobiome Are Impacted by Soil Properties and Host Genotype G Bonito, GMN Benucci, K Hameed, D Weighill, P Jones, KH Chen, ... Frontiers in Microbiology 10, 481, 2019 | 54 | 2019 |
| Genus-wide assessment of lignocellulose utilization in the extremely thermophilic genus Caldicellulosiruptor by genomic, pangenomic, and metagenomic analyses LL Lee, SE Blumer-Schuette, JA Izquierdo, JV Zurawski, AJ Loder, ... Applied and environmental microbiology 84 (9), e02694-17, 2018 | 50 | 2018 |
| Defining the genetic components of callus formation: a GWAS approach GA Tuskan, R Mewalal, LE Gunter, KJ Palla, K Carter, DA Jacobson, ... PLoS One 13 (8), e0202519, 2018 | 45 | 2018 |
| High throughput screening technologies in biomass characterization SR Decker, AE Harman-Ware, RM Happs, EJ Wolfrum, GA Tuskan, ... Frontiers in Energy Research 6, 120, 2018 | 38 | 2018 |
| Characterization of DWARF14 Genes in Populus K Zheng, X Wang, DA Weighill, HB Guo, M Xie, Y Yang, J Yang, S Wang, ... Scientific Reports 6 (1), 21593, 2016 | 35 | 2016 |
| Pleiotropic and epistatic network-based discovery: integrated networks for target gene discovery D Weighill, P Jones, M Shah, P Ranjan, W Muchero, J Schmutz, ... Frontiers in Energy Research 6, 30, 2018 | 29 | 2018 |
| Multi-phenotype association decomposition: unraveling complex gene-phenotype relationships D Weighill, P Jones, C Bleker, P Ranjan, M Shah, N Zhao, M Martin, ... Frontiers in Genetics 10, 417, 2019 | 28 | 2019 |
| Data integration in poplar:‘omics layers and integration strategies D Weighill, TJ Tschaplinski, GA Tuskan, D Jacobson Frontiers in Genetics 10, 874, 2019 | 27 | 2019 |
| Gene regulatory network inference as relaxed graph matching D Weighill, MB Guebila, C Lopes-Ramos, K Glass, J Quackenbush, ... Proceedings of the AAAI Conference on Artificial Intelligence 35 (11), 10263 …, 2021 | 25 | 2021 |
| Parallel accelerated vector similarity calculations for genomics applications W Joubert, J Nance, D Weighill, D Jacobson Parallel Computing 75, 130-145, 2018 | 25 | 2018 |
| Gene targeting in disease networks D Weighill, M Ben Guebila, K Glass, J Platig, JJ Yeh, J Quackenbush Frontiers in Genetics 12, 649942, 2021 | 23 | 2021 |
| Finding New Cell Wall Regulatory Genes in Populus trichocarpa Using Multiple Lines of Evidence A Furches, D Kainer, D Weighill, A Large, P Jones, AM Walker, J Romero, ... Frontiers in plant science 10, 1249, 2019 | 20 | 2019 |
| Predicting genotype-specific gene regulatory networks D Weighill, MB Guebila, K Glass, J Quackenbush, J Platig Genome Research 32 (3), 524-533, 2022 | 16 | 2022 |
| Wavelet-based genomic signal processing for centromere identification and hypothesis generation D Weighill, D Macaya-Sanz, SP DiFazio, W Joubert, M Shah, J Schmutz, ... Frontiers in genetics 10, 487, 2019 | 16 | 2019 |