ZDOCK server: interactive docking prediction of protein–protein complexes and symmetric multimers BG Pierce, K Wiehe, H Hwang, BH Kim, T Vreven, Z Weng Bioinformatics 30 (12), 1771-1773, 2014 | 1699 | 2014 |
PROMALS3D: a tool for multiple protein sequence and structure alignments J Pei, BH Kim, NV Grishin Nucleic acids research 36 (7), 2295-2300, 2008 | 1452 | 2008 |
Structure prediction for CASP8 with all‐atom refinement using Rosetta S Raman, R Vernon, J Thompson, M Tyka, R Sadreyev, J Pei, D Kim, ... Proteins: Structure, Function, and Bioinformatics 77 (S9), 89-99, 2009 | 613 | 2009 |
Factorbook. org: a Wiki-based database for transcription factor-binding data generated by the ENCODE consortium J Wang, J Zhuang, S Iyer, XY Lin, MC Greven, BH Kim, J Moore, ... Nucleic acids research 41 (D1), D171-D176, 2012 | 447 | 2012 |
ECOD: an evolutionary classification of protein domains H Cheng, RD Schaeffer, Y Liao, LN Kinch, J Pei, S Shi, BH Kim, ... PLoS computational biology 10 (12), e1003926, 2014 | 384 | 2014 |
Principles of regulatory information conservation between mouse and human Y Cheng, Z Ma, BH Kim, W Wu, P Cayting, AP Boyle, V Sundaram, X Xing, ... Nature 515 (7527), 371-375, 2014 | 303 | 2014 |
Expression profiling of nuclear receptors in human and mouse embryonic stem cells CQ Xie, Y Jeong, M Fu, AL Bookout, MT Garcia-Barrio, T Sun, B Kim, ... Molecular endocrinology 23 (5), 724-733, 2009 | 89 | 2009 |
Discrete–continuous duality of protein structure space RI Sadreyev, BH Kim, NV Grishin Current opinion in structural biology 19 (3), 321-328, 2009 | 82 | 2009 |
PROMALS web server for accurate multiple protein sequence alignments J Pei, BH Kim, M Tang, NV Grishin Nucleic acids research 35 (suppl_2), W649-W652, 2007 | 75 | 2007 |
Genome Sequence of the Thermotolerant Yeast Kluyveromyces marxianus var. marxianus KCTC 17555 H Jeong, DH Lee, SH Kim, HJ Kim, K Lee, JY Song, BK Kim, BH Sung, ... Eukaryotic cell 11 (12), 1584-1585, 2012 | 67 | 2012 |
The full transcription map of mouse papillomavirus type 1 (MmuPV1) in mouse wart tissues XY Xue, V Majerciak, A Uberoi, BH Kim, D Gotte, X Chen, M Cam, ... PLoS pathogens 13 (11), e1006715, 2017 | 60 | 2017 |
Cancer classification of single-cell gene expression data by neural network BH Kim, K Yu, PCW Lee Bioinformatics 36 (5), 1360-1366, 2020 | 53 | 2020 |
HNRNPH1-dependent splicing of a fusion oncogene reveals a targetable RNA G-quadruplex interaction C Neckles, RE Boer, N Aboreden, AM Cross, RL Walker, BH Kim, S Kim, ... Rna 25 (12), 1731-1750, 2019 | 47 | 2019 |
MALISAM: a database of structurally analogous motifs in proteins H Cheng, BH Kim, NV Grishin Nucleic acids research 36 (suppl_1), D211-D217, 2007 | 43 | 2007 |
In situ transcriptome characteristics are lost following culture adaptation of adult cardiac stem cells T Kim, OH Echeagaray, BJ Wang, A Casillas, KM Broughton, BH Kim, ... Scientific reports 8 (1), 12060, 2018 | 41 | 2018 |
Analysis of CASP8 targets, predictions and assessment methods SY Shi, J Pei, RI Sadreyev, LN Kinch, I Majumdar, J Tong, H Cheng, ... Database: the journal of biological databases and curation 2009, bap003, 2009 | 40 | 2009 |
O-GlcNAcase is an RNA polymerase II elongation factor coupled to pausing factors SPT5 and TIF1β M Resto, BH Kim, AG Fernandez, BJ Abraham, K Zhao, BA Lewis Journal of Biological Chemistry 291 (43), 22703-22713, 2016 | 37 | 2016 |
COMPASS server for remote homology inference RI Sadreyev, M Tang, BH Kim, NV Grishin Nucleic acids research 35 (suppl_2), W653-W658, 2007 | 36 | 2007 |
MALIDUP: a database of manually constructed structure alignments for duplicated domain pairs H Cheng, BH Kim, NV Grishin Proteins: Structure, Function, and Bioinformatics 70 (4), 1162-1166, 2008 | 31 | 2008 |
COMPASS server for homology detection: improved statistical accuracy, speed and functionality RI Sadreyev, M Tang, BH Kim, NV Grishin Nucleic acids research 37 (suppl_2), W90-W94, 2009 | 29 | 2009 |