Manuel N. Melo

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Siewert J. MarrinkProfessor of Molecular Dynamics, University of GroningenAdresse e-mail validée de rug.nl
Miguel A. R. B. CastanhoBiochemistry, School of Medicine and Institute of Molecular Medicine, University of Lisbon, PortugalAdresse e-mail validée de medicina.ulisboa.pt
Helgi I. IngólfssonLawrence Livermore National LaboratoryAdresse e-mail validée de llnl.gov
D. Peter TielemanCanada Research Chair in Molecular Simulation, University of CalgaryAdresse e-mail validée de ucalgary.ca
Nuno C. SantosInstituto de Medicina Molecular, Faculdade de Medicina, Universidade de LisboaAdresse e-mail validée de fm.ul.pt
Floris J. van EerdeniFReC, Osaka UniversityAdresse e-mail validée de ifrec.osaka-u.ac.jp
Matej PraprotnikLaboratory for Molecular Modeling, National Institute of Chemistry, Ljubljana, SloveniaAdresse e-mail validée de cmm.ki.si
Sónia Troeira HenriquesQueensland University of Technology (QUT), Translational Research Institute (TRI)Adresse e-mail validée de qut.edu.au
César A LópezResearch associate-Los alamos national laboratoryAdresse e-mail validée de lanl.gov
Marcelo Fabricio Masmansenior researcher, University of AmsterdamAdresse e-mail validée de uva.nl
Miguel X. FernandesUniversity of MadeiraAdresse e-mail validée de uma.pt
ANDREU DUniversitat Pompeu Fabra (UPF)Adresse e-mail validée de upf.edu
N. GogaAdresse e-mail validée de rug.nl
Valerie UytterhoevenStaff ScientistAdresse e-mail validée de kuleuven.vib.be
Patrik VerstrekenVIB Center for Brain & Disease Research & KU Leuven, Department of NeurosciencesAdresse e-mail validée de kuleuven.vib.be
Fabio Ceneviva Lacerda de AlmeidaProfessor of Biochemistry, Federal University of Rio de JaneiroAdresse e-mail validée de bioqmed.ufrj.br
Ana Paula ValenteFull Professor of Structural Biology, Federal University of Rio de JaneiroAdresse e-mail validée de bioqmed.ufrj.br
Xavier Periolehome
Joao Miguel Freire

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Manuel N. Melo

ITQB NOVA

Adresse e-mail validée de itqb.unl.pt - Page d'accueil

Molecular Dynamics Coarse Grain Antimicrobial Peptides Membrane Biophysics


Titre Trier par citations Trier par année Trier par titre	Citée par Citée par	Année
MDAnalysis: a Python package for the rapid analysis of molecular dynamics simulations RJ Gowers, M Linke, J Barnoud, TJE Reddy, MN Melo, SL Seyler, ... Los Alamos National Laboratory (LANL), Los Alamos, NM (United States), 2019	1484	2019
Lipid organization of the plasma membrane HI Ingólfsson, MN Melo, FJ Van Eerden, C Arnarez, CA Lopez, ... Journal of the american chemical society 136 (41), 14554-14559, 2014	965	2014
Antimicrobial peptides: linking partition, activity and high membrane-bound concentrations MN Melo, R Ferre, MARB Castanho Nature Reviews Microbiology 7 (3), 245-250, 2009	840	2009
Cell-penetrating peptides and antimicrobial peptides: how different are they? ST Henriques, MN Melo, MARB Castanho Biochemical Journal 399 (1), 1-7, 2006	529	2006
Lipid–protein interactions are unique fingerprints for membrane proteins V Corradi, E Mendez-Villuendas, HI Ingólfsson, RX Gu, I Siuda, MN Melo, ... ACS central science 4 (6), 709-717, 2018	315	2018
Dry Martini, a coarse-grained force field for lipid membrane simulations with implicit solvent C Arnarez, JJ Uusitalo, MF Masman, HI Ingólfsson, DH De Jong, MN Melo, ... Journal of chemical theory and computation 11 (1), 260-275, 2015	314	2015
Escherichia coli cell surface perturbation and disruption induced by antimicrobial peptides BP100 and pepR CS Alves, MN Melo, HG Franquelim, R Ferre, M Planas, L Feliu, E Bardají, ... Journal of Biological Chemistry 285 (36), 27536-27544, 2010	277	2010
Pitfalls of the Martini model R Alessandri, PCT Souza, S Thallmair, MN Melo, AH De Vries, SJ Marrink Journal of chemical theory and computation 15 (10), 5448-5460, 2019	213	2019
Ceramides bind VDAC2 to trigger mitochondrial apoptosis S Dadsena, S Bockelmann, JGM Mina, DG Hassan, S Korneev, ... Nature communications 10 (1), 1832, 2019	191	2019
Hsc70-4 deforms membranes to promote synaptic protein turnover by endosomal microautophagy V Uytterhoeven, E Lauwers, I Maes, K Miskiewicz, MN Melo, J Swerts, ... Neuron 88 (4), 735-748, 2015	185	2015
Two decades of Martini: Better beads, broader scope SJ Marrink, L Monticelli, MN Melo, R Alessandri, DP Tieleman, ... Wiley Interdisciplinary Reviews: Computational Molecular Science 13 (1), e1620, 2023	161	2023
Parameters for Martini sterols and hopanoids based on a virtual-site description MN Melo, HI Ingólfsson, SJ Marrink The Journal of chemical physics 143 (24), 2015	160	2015
Synergistic effects of the membrane actions of cecropin-melittin antimicrobial hybrid peptide BP100 R Ferre, MN Melo, AD Correia, L Feliu, E Bardají, M Planas, M Castanho Biophysical journal 96 (5), 1815-1827, 2009	122	2009
Using zeta-potential measurements to quantify peptide partition to lipid membranes JM Freire, MM Domingues, J Matos, MN Melo, AS Veiga, NC Santos, ... European biophysics journal 40, 481-487, 2011	120	2011
Omiganan pentahydrochloride in the front line of clinical applications of antimicrobial peptides MN Melo, D Dugourd, MARB Castanho Recent patents on anti-infective drug discovery 1 (2), 201-207, 2006	111	2006
Exchange pathways of plastoquinone and plastoquinol in the photosystem II complex FJ Van Eerden, MN Melo, PWJM Frederix, X Periole, SJ Marrink Nature communications 8 (1), 15214, 2017	100	2017
Adaptive resolution simulation of an atomistic protein in MARTINI water J Zavadlav, MN Melo, SJ Marrink, M Praprotnik The Journal of chemical physics 140 (5), 2014	100	2014
Omiganan interaction with bacterial membranes and cell wall models. Assigning a biological role to saturation MN Melo, MARB Castanho Biochimica et Biophysica Acta (BBA)-Biomembranes 1768 (5), 1277-1290, 2007	76	2007
Interaction of the dengue virus fusion peptide with membranes assessed by NMR: the essential role of the envelope protein Trp101 for membrane fusion MN Melo, FJR Sousa, FA Carneiro, MARB Castanho, AP Valente, ... Journal of Molecular Biology 392 (3), 736-746, 2009	68	2009
Adaptive resolution simulation of MARTINI solvents J Zavadlav, MN Melo, AV Cunha, AH De Vries, SJ Marrink, M Praprotnik Journal of Chemical Theory and Computation 10 (6), 2591-2598, 2014	66	2014

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