Stefano Beretta

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Coauteurs

Ivan MerelliResearcher in Bioinformatics, Institute for Biomedical TechnologiesAdresse e-mail validée de itb.cnr.it
Samuele FerrariSan Raffaele Telethon Institute for Gene TherapyAdresse e-mail validée de hsr.it
Anastasia ContiProject Leader at SR-Tiget, Milan, ItalyAdresse e-mail validée de hsr.it
Andrea CalabriaSan Raffaele Telethon Institute for Gene TherapyAdresse e-mail validée de hsr.it
Gianluca Della VedovaUniversità degli Studi di Milano-BicoccaAdresse e-mail validée de dellavedova.org
Mauro CastelliFull Professor at NOVA IMS, Universidade Nova de LisboaAdresse e-mail validée de novaims.unl.pt
Raffaella RizziRicercatore confermato in Informatica, Università degli Studi di Milano-BicoccaAdresse e-mail validée de disco.unimib.it
Davide CittaroCOSR, San Raffaele Hospital, ItalyAdresse e-mail validée de hsr.it
Matteo BarcellaBioinformatician at SR-TIGETAdresse e-mail validée de hsr.it
Luciano MilanesiInstitute for Biomedical Technologies (ITB) National Research Council of Italy (CNR)Adresse e-mail validée de itb.cnr.it
Pietro Genovese, Ph.D.Harvard Medical SchoolAdresse e-mail validée de dfci.harvard.edu
Yuri PirolaAssociate professor at DISCo, Univ. of Milano-BicoccaAdresse e-mail validée de unimib.it
Riccardo DondiUniversità degli studi di BergamoAdresse e-mail validée de unibg.it
Eng. Giulio Spinozzi, PhDSan Raffaele Telethon Institute for Gene Therapy & AI-CODE CoordinatorAdresse e-mail validée de hsr.it
Ivo GonçalvesUniversity of CoimbraAdresse e-mail validée de dei.uc.pt
Luca DentiComenius University in BratislavaAdresse e-mail validée de uniba.sk
Daniele RamazzottiDepartment of Medicine and Surgery, University of Milano-Bicocca, Milano, ItalyAdresse e-mail validée de unimib.it
Niko BeerenwinkelProfessor of Computational Biology, ETH ZurichAdresse e-mail validée de bsse.ethz.ch
Daniele D'AgostinoUniversità degli studi di GenovaAdresse e-mail validée de unige.it
Gabriel ValienteTechnical University of CataloniaAdresse e-mail validée de lsi.upc.edu

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Stefano Beretta

San Raffaele Telethon Institute for Gene Therapy

Adresse e-mail validée de hsr.it - Page d'accueil

Computer Science Algorithms Bioinformatics


Titre Trier par citations Trier par année Trier par titre	Citée par Citée par	Année
Precise gene editing preserves hematopoietic stem cell function following transient p53-mediated DNA damage response G Schiroli, A Conti, S Ferrari, L Della Volpe, A Jacob, L Albano, S Beretta, ... Cell stem cell 24 (4), 551-565. e8, 2019	290	2019
Efficient gene editing of human long-term hematopoietic stem cells validated by clonal tracking S Ferrari, A Jacob, S Beretta, G Unali, L Albano, V Vavassori, D Cittaro, ... Nature biotechnology 38 (11), 1298-1308, 2020	151	2020
HIV-1-mediated insertional activation of STAT5B and BACH2 trigger viral reservoir in T regulatory cells D Cesana, FR Santoni de Sio, L Rudilosso, P Gallina, A Calabria, ... Nature communications 8 (1), 498, 2017	109	2017
Genotoxic effects of base and prime editing in human hematopoietic stem cells M Fiumara, S Ferrari, A Omer-Javed, S Beretta, L Albano, D Canarutto, ... Nature biotechnology 42 (6), 877-891, 2024	94	2024
Choice of template delivery mitigates the genotoxic risk and adverse impact of editing in human hematopoietic stem cells S Ferrari, A Jacob, D Cesana, M Laugel, S Beretta, A Varesi, G Unali, ... Cell Stem Cell 29 (10), 1428-1444. e9, 2022	80	2022
Learning the structure of Bayesian Networks: A quantitative assessment of the effect of different algorithmic schemes S Beretta, M Castelli, I Gonçalves, R Henriques, D Ramazzotti Complexity 2018, 2018	68	2018
Overlap graphs and de Bruijn graphs: data structures for de novo genome assembly in the big data era R Rizzi, S Beretta, M Patterson, Y Pirola, M Previtali, G Della Vedova, ... Quantitative Biology 7, 278-292, 2019	53	2019
Targeted inducible delivery of immunoactivating cytokines reprograms glioblastoma microenvironment and inhibits growth in mouse models F Birocchi, M Cusimano, F Rossari, S Beretta, PMV Rancoita, A Ranghetti, ... Science translational medicine 14 (653), eabl4106, 2022	51	2022
ASGAL: aligning RNA-Seq data to a splicing graph to detect novel alternative splicing events L Denti, R Rizzi, S Beretta, GD Vedova, M Previtali, P Bonizzoni BMC bioinformatics 19, 1-21, 2018	48	2018
Modeling, optimization, and comparable efficacy of T cell and hematopoietic stem cell gene editing for treating hyper‐IgM syndrome V Vavassori, E Mercuri, GE Marcovecchio, MC Castiello, G Schiroli, ... EMBO Molecular Medicine 13 (3), e13545, 2021	47	2021
Integrated multiomic profiling identifies the epigenetic regulator PRC2 as a therapeutic target to counteract leukemia immune escape and relapse V Gambacorta, S Beretta, M Ciccimarra, L Zito, K Giannetti, A Andrisani, ... Cancer Discovery 12 (6), 1449-1461, 2022	38	2022
Lipid nanoparticles allow efficient and harmless ex vivo gene editing of human hematopoietic cells V Vavassori, S Ferrari, S Beretta, C Asperti, L Albano, A Annoni, ... Blood 142 (9), 812-826, 2023	34	2023
In vivo macrophage engineering reshapes the tumor microenvironment leading to eradication of liver metastases T Kerzel, G Giacca, S Beretta, C Bresesti, M Notaro, GM Scotti, ... Cancer Cell 41 (11), 1892-1910. e10, 2023	33	2023
Further steps in TANGO: improved taxonomic assignment in metagenomics D Alonso-Alemany, A Barré, S Beretta, P Bonizzoni, M Nikolski, ... Bioinformatics 30 (1), 17-23, 2014	33	2014
Hematopoietic stem cell function in β-thalassemia is impaired and is rescued by targeting the bone marrow niche A Aprile, A Gulino, M Storto, I Villa, S Beretta, I Merelli, A Rubinacci, ... Blood, The Journal of the American Society of Hematology 136 (5), 610-622, 2020	29	2020
VISPA2: a scalable pipeline for high-throughput identification and annotation of vector integration sites G Spinozzi, A Calabria, S Brasca, S Beretta, I Merelli, L Milanesi, ... BMC bioinformatics 18, 1-12, 2017	29	2017
Oncogene-induced senescence in hematopoietic progenitors features myeloid restricted hematopoiesis, chronic inflammation and histiocytosis R Biavasco, E Lettera, K Giannetti, D Gilioli, S Beretta, A Conti, S Scala, ... Nature Communications 12 (1), 4559, 2021	26	2021
Modeling alternative splicing variants from RNA-Seq data with isoform graphs S Beretta, P Bonizzoni, GD Vedova, Y Pirola, R Rizzi Journal of Computational Biology 21 (1), 16-40, 2014	25	2014
Premature senescence and increased oxidative stress in the thymus of down syndrome patients GE Marcovecchio, F Ferrua, E Fontana, S Beretta, M Genua, I Bortolomai, ... Frontiers in Immunology 12, 669893, 2021	24	2021
A hybrid genetic algorithm for the repetition free longest common subsequence problem M Castelli, S Beretta, L Vanneschi Operations Research Letters 41 (6), 644-649, 2013	19	2013

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