Luke Zappia

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Alicia OshlackPeter MacCallum Cancer CentreAdresse e-mail validée de petermac.org
Fabian J TheisHelmholtz Munich, Technical University of MunichAdresse e-mail validée de helmholtz-muenchen.de
Belinda PhipsonLaboratory Head, The Walter and Eliza Hall Institute of Medical ResearchAdresse e-mail validée de wehi.edu.au
Alexander N CombesMonash Biomedicine Discovery Institute, Department of Anatomy and Developmental Biology, MonashAdresse e-mail validée de monash.edu
Kynan LawlorMurdoch Childrens Research InstituteAdresse e-mail validée de mcri.edu.au
Malte D. LueckenGroup leader, Integrative genomics lab, Helmholtz MunichAdresse e-mail validée de helmholtz-muenchen.de
Lukas HeumosPostdoc in Theis lab at Helmholtz Munich | Research Software Engineer at LaminLabs | scverseAdresse e-mail validée de helmholtz-muenchen.de
Daniel C. StroblPhD student at Helmholtz MunichAdresse e-mail validée de tum.de
Maren BüttnerPrincipal Data Scientist at Calico Life SciencesAdresse e-mail validée de calicolabs.com
Shanika L. AmarasinghePostdoctoral Research Fellow, Biomedicine Discovery Institute, Monash UniversityAdresse e-mail validée de monash.edu
Matthew E RitchieThe Walter and Eliza Hall Institute of Medical ResearchAdresse e-mail validée de wehi.edu.au
Shian SuWalter and Eliza Hall InstituteAdresse e-mail validée de wehi.edu.au
Kridsadakorn ChaichoompuHelmholtz Zentrum MünchenAdresse e-mail validée de biostatgen.org
Arthur L HsuCSLAdresse e-mail validée de csl.com.au
Graham TaylorViapath, Guy's Hospital & King's College, LondonAdresse e-mail validée de kcl.ac.uk
Frederic HollandeThe University of MelbourneAdresse e-mail validée de unimelb.edu.au

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Luke Zappia

Data Intuitive/Helmholtz Munich

Adresse e-mail validée de helmholtz-muenchen.de - Page d'accueil

Bioinformatics Computational Biology


Titre Trier par citations Trier par année Trier par titre	Citée par Citée par	Année
Opportunities and challenges in long-read sequencing data analysis SL Amarasinghe, S Su, X Dong, L Zappia, ME Ritchie, Q Gouil Genome biology 21 (1), 30, 2020	1508	2020
Benchmarking atlas-level data integration in single-cell genomics MD Luecken, M Büttner, K Chaichoompu, A Danese, M Interlandi, ... Nature methods 19 (1), 41-50, 2022	838	2022
Splatter: simulation of single-cell RNA sequencing data L Zappia, B Phipson, A Oshlack Genome biology 18 (1), 174, 2017	828	2017
Clustering trees: a visualization for evaluating clusterings at multiple resolutions L Zappia, A Oshlack Gigascience 7 (7), giy083, 2018	672	2018
Best practices for single-cell analysis across modalities L Heumos, AC Schaar, C Lance, A Litinetskaya, F Drost, L Zappia, ... Nature Reviews Genetics 24 (8), 550-572, 2023	536	2023
An integrated cell atlas of the lung in health and disease L Sikkema, C Ramírez-Suástegui, DC Strobl, TE Gillett, L Zappia, ... Nature medicine 29 (6), 1563-1577, 2023	358	2023
Exploring the single-cell RNA-seq analysis landscape with the scRNA-tools database L Zappia, B Phipson, A Oshlack PLoS computational biology 14 (6), e1006245, 2018	309	2018
Evaluation of variability in human kidney organoids B Phipson, PX Er, AN Combes, TA Forbes, SE Howden, L Zappia, HJ Yen, ... Nature methods 16 (1), 79-87, 2019	231	2019
Circulating tumour cells from patients with colorectal cancer have cancer stem cell hallmarks in ex vivo culture F Grillet, E Bayet, O Villeronce, L Zappia, EL Lagerqvist, S Lunke, ... Gut 66 (10), 1802-1810, 2017	203	2017
Single-cell analysis reveals congruence between kidney organoids and human fetal kidney AN Combes, L Zappia, PX Er, A Oshlack, MH Little Genome medicine 11, 1-15, 2019	194	2019
Over 1000 tools reveal trends in the single-cell RNA-seq analysis landscape L Zappia, FJ Theis Genome biology 22, 1-18, 2021	164	2021
Single cell analysis of the developing mouse kidney provides deeper insight into marker gene expression and ligand-receptor crosstalk AN Combes, B Phipson, KT Lawlor, A Dorison, R Patrick, L Zappia, ... Development 146 (12), dev178673, 2019	159	2019
Kidney micro-organoids in suspension culture as a scalable source of human pluripotent stem cell-derived kidney cells SV Kumar, PX Er, KT Lawlor, A Motazedian, M Scurr, I Ghobrial, ... Development 146 (5), dev172361, 2019	134	2019
Gene length and detection bias in single cell RNA sequencing protocols B Phipson, L Zappia, A Oshlack F1000Research 6, 2017	80	2017
An integrated cell atlas of the human lung in health and disease L Sikkema, D Strobl, L Zappia, E Madissoon, NS Markov, L Zaragosi, ... BioRxiv, 2022.03. 10.483747, 2022	64	2022
Nephron progenitor commitment is a stochastic process influenced by cell migration KT Lawlor, L Zappia, J Lefevre, JS Park, NA Hamilton, A Oshlack, ... Elife 8, e41156, 2019	57	2019
Population-level integration of single-cell datasets enables multi-scale analysis across samples C De Donno, S Hediyeh-Zadeh, AA Moinfar, M Wagenstetter, L Zappia, ... Nature Methods 20 (11), 1683-1692, 2023	55	2023
Delineating mouse β-cell identity during lifetime and in diabetes with a single cell atlas K Hrovatin, A Bastidas-Ponce, M Bakhti, L Zappia, M Büttner, C Salinno, ... Nature metabolism 5 (9), 1615-1637, 2023	34	2023
Development, characterization and solubility study of solid dispersion of terbinafine hydrochloride by solvent evaporation method N Kumar, AK Jain, C Singh, R Kumar Asian Journal of Pharmaceutics (AJP) 2 (3), 2008	31	2008
Sfaira accelerates data and model reuse in single cell genomics DS Fischer, L Dony, M König, A Moeed, L Zappia, L Heumos, S Tritschler, ... Genome Biology 22, 1-21, 2021	29	2021

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