TOPCONS: consensus prediction of membrane protein topology A Bernsel, H Viklund, A Hennerdal, A Elofsson Nucleic acids research 37 (suppl_2), W465-W468, 2009 | 630 | 2009 |
OCTOPUS: improving topology prediction by two-track ANN-based preference scores and an extended topological grammar H Viklund, A Elofsson Bioinformatics 24 (15), 1662-1668, 2008 | 475 | 2008 |
Prediction of membrane-protein topology from first principles A Bernsel, H Viklund, J Falk, E Lindahl, G Von Heijne, A Elofsson Proceedings of the National Academy of Sciences 105 (20), 7177-7181, 2008 | 361 | 2008 |
Best α‐helical transmembrane protein topology predictions are achieved using hidden Markov models and evolutionary information H Viklund, A Elofsson Protein Science 13 (7), 1908-1917, 2004 | 314 | 2004 |
SPOCTOPUS: a combined predictor of signal peptides and membrane protein topology H Viklund, A Bernsel, M Skwark, A Elofsson Bioinformatics 24 (24), 2928-2929, 2008 | 279 | 2008 |
Structural classification and prediction of reentrant regions in α-helical transmembrane proteins: application to complete genomes H Viklund, E Granseth, A Elofsson Journal of molecular biology 361 (3), 591-603, 2006 | 111 | 2006 |
ZPRED: predicting the distance to the membrane center for residues in α-helical membrane proteins E Granseth, H Viklund, A Elofsson Bioinformatics 22 (14), e191-e196, 2006 | 68 | 2006 |
PONGO: a web server for multiple predictions of all-alpha transmembrane proteins M Amico, M Finelli, I Rossi, A Zauli, A Elofsson, H Viklund, G von Heijne, ... Nucleic acids research 34 (suppl_2), W169-W172, 2006 | 48 | 2006 |
Estimating the length of transmembrane helices using Z‐coordinate predictions C Papaloukas, E Granseth, H Viklund, A Elofsson Protein Science 17 (2), 271-278, 2008 | 29 | 2008 |
Remote homology detection of integral membrane proteins using conserved sequence features A Bernsel, H Viklund, A Elofsson Proteins: Structure, Function, and Bioinformatics 71 (3), 1387-1399, 2008 | 13 | 2008 |
A method that improves topology prediction for transmembrane proteins by using two-track ANN-based preference scores and an improved topological grammar H Viklund Bioinformatics 24, 1662-1668, 2008 | 12 | 2008 |
Development of a modular HMM package for biological sequence analysis H Viklund Univ., 2003 | 1 | 2003 |
Formalizing life: Towards an improved understanding of the sequence-structure relationship in alpha-helical transmembrane proteins H Viklund Institutionen för biokemi och biofysik, 2007 | | 2007 |
Welcome to the workshop! SA SBC, A Bernsel, Å Björklund, D Ekman, J Frey-Skøtt, P Larsson, ... | | |