Articles avec mandats d'accès public - Erik van NimwegenEn savoir plus
Disponibles quelque part : 59
A promoter-level mammalian expression atlas
Nature 507 (7493), 462-470, 2014
Exigences : US National Institutes of Health, UK Biotechnology and Biological Sciences …
DNA-binding factors shape the mouse methylome at distal regulatory regions
MB Stadler, R Murr, L Burger, R Ivanek, F Lienert, A Schöler, E Nimwegen, ...
Nature 480 (7378), 490-495, 2011
Exigences : Fonds national suisse
An atlas of combinatorial transcriptional regulation in mouse and man
T Ravasi, H Suzuki, CV Cannistraci, S Katayama, VB Bajic, K Tan, ...
Cell 140 (5), 744-752, 2010
Exigences : US National Institutes of Health
Sox4 is a master regulator of epithelial-mesenchymal transition by controlling Ezh2 expression and epigenetic reprogramming
N Tiwari, VK Tiwari, L Waldmeier, PJ Balwierz, P Arnold, M Pachkov, ...
Cancer cell 23 (6), 768-783, 2013
Exigences : Fonds national suisse, German Research Foundation
Automated reconstruction of whole-genome phylogenies from short-sequence reads
F Bertels, OK Silander, M Pachkov, PB Rainey, E Van Nimwegen
Molecular biology and evolution 31 (5), 1077-1088, 2014
Exigences : Fonds national suisse
Inference of miRNA targets using evolutionary conservation and pathway analysis
D Gaidatzis, E van Nimwegen, J Hausser, M Zavolan
BMC bioinformatics 8, 1-22, 2007
Exigences : Fonds national suisse
The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line
Nature genetics 41 (5), 553-562, 2009
Exigences : Fonds national suisse, US National Institutes of Health
Adipose tissue microRNAs as regulators of CCL2 production in human obesity
E Arner, N Mejhert, A Kulyté, PJ Balwierz, M Pachkov, M Cormont, ...
Diabetes 61 (8), 1986-1993, 2012
Exigences : Swedish Research Council
ISMARA: automated modeling of genomic signals as a democracy of regulatory motifs
PJ Balwierz, M Pachkov, P Arnold, AJ Gruber, M Zavolan, ...
Genome research 24 (5), 869-884, 2014
Exigences : Fonds national suisse
Disentangling direct from indirect co-evolution of residues in protein alignments
L Burger, E Van Nimwegen
PLoS computational biology 6 (1), e1000633, 2010
Exigences : Fonds national suisse
Investigate the origins of COVID-19
JD Bloom, YA Chan, RS Baric, PJ Bjorkman, S Cobey, BE Deverman, ...
Science 372 (6543), 694-694, 2021
Exigences : Howard Hughes Medical Institute
Klf4 is a transcriptional regulator of genes critical for EMT, including Jnk1 (Mapk8)
N Tiwari, N Meyer-Schaller, P Arnold, H Antoniadis, M Pachkov, ...
PloS one 8 (2), e57329, 2013
Exigences : Fonds national suisse
A biophysical miRNA-mRNA interaction model infers canonical and noncanonical targets
M Khorshid, J Hausser, M Zavolan, E Van Nimwegen
Nature methods 10 (3), 253-255, 2013
Exigences : Fonds national suisse
Global 3′ UTR shortening has a limited effect on protein abundance in proliferating T cells
AR Gruber, G Martin, P Müller, A Schmidt, AJ Gruber, R Gumienny, ...
Nature communications 5 (1), 5465, 2014
Exigences : Fonds national suisse
Tead2 expression levels control the subcellular distribution of Yap and Taz, zyxin expression and epithelial–mesenchymal transition
M Diepenbruck, L Waldmeier, R Ivanek, P Berninger, P Arnold, ...
Journal of cell science 127 (7), 1523-1536, 2014
Exigences : Fonds national suisse, Swiss Cancer League
Methods for analyzing deep sequencing expression data: constructing the human and mouse promoterome with deepCAGE data
PJ Balwierz, P Carninci, CO Daub, J Kawai, Y Hayashizaki, W Van Belle, ...
Genome biology 10, 1-21, 2009
Exigences : Fonds national suisse
SwissRegulon, a database of genome-wide annotations of regulatory sites: recent updates
M Pachkov, PJ Balwierz, P Arnold, E Ozonov, E Van Nimwegen
Nucleic acids research 41 (D1), D214-D220, 2012
Exigences : Fonds national suisse
The functional importance of telomere clustering: global changes in gene expression result from SIR factor dispersion
A Taddei, G Van Houwe, S Nagai, I Erb, E van Nimwegen, SM Gasser
Genome research 19 (4), 611-625, 2009
Exigences : Fonds national suisse
Modeling of epigenome dynamics identifies transcription factors that mediate Polycomb targeting
P Arnold, A Schöler, M Pachkov, PJ Balwierz, H Jørgensen, MB Stadler, ...
Genome research 23 (1), 60-73, 2013
Exigences : Fonds national suisse
Expression noise facilitates the evolution of gene regulation
L Wolf, O Silander, E van Nimwegen
eLife 4, e05856, 2015
Exigences : Fonds national suisse
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