Julian Parkhill

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Stephen BentleyWellcome Sanger InstituteAdresse e-mail validée de sanger.ac.uk
Simon R. HarrisSenior Program Officer, Bill & Melinda Gates FoundationAdresse e-mail validée de sanger.ac.uk
Matthew HoldenUniversity of St AndrewsAdresse e-mail validée de st-andrews.ac.uk
Alan WalkerProfessor, Rowett Institute, University of AberdeenAdresse e-mail validée de abdn.ac.uk
Nick CroucherImperial CollegeAdresse e-mail validée de imperial.ac.uk
Mark A HolmesUniversity of CambridgeAdresse e-mail validée de cam.ac.uk
Thomas ConnorProfessor, Cardiff University ; Head of Public Health Genomics, Public Health WalesAdresse e-mail validée de cardiff.ac.uk
Dr Estee TorokUniversity of CambridgeAdresse e-mail validée de cam.ac.uk
Sandra ReuterMedical Center - University of Freiburg, Infection Prevention and ControlAdresse e-mail validée de uniklinik-freiburg.de
Ewan M HarrisonWellcome Sanger InstituteAdresse e-mail validée de sanger.ac.uk
Brendan WrenProfessor of Pathogen Molecular BiologyAdresse e-mail validée de lshtm.ac.uk
Stephen BakerUniversity of CambridgeAdresse e-mail validée de medschl.cam.ac.uk
Francesc CollInstitute of Biomedicine of Valencia (IBV), Spanish National Research Council (CSIC)Adresse e-mail validée de ibv.csic.es
Josie BryantUniversity of CambridgeAdresse e-mail validée de sanger.ac.uk
Andrew J. PageDirector of Technical Innovation, Theiagen GenomicsAdresse e-mail validée de quadram.ac.uk
R. Andres FlotoUniversity of CambridgeAdresse e-mail validée de cam.ac.uk
Gavin PatersonUniversity of EdinburghAdresse e-mail validée de ed.ac.uk
Claudio U. KöserUniversity of CambridgeAdresse e-mail validée de cam.ac.uk
John WainQuadram Institute BiosciencesAdresse e-mail validée de jidc.org
Susannah Jane SalterUniversity of CambridgeAdresse e-mail validée de cam.ac.uk

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Julian Parkhill

University of Cambridge

Adresse e-mail validée de cam.ac.uk - Page d'accueil

Genomics microbiology bioinformatics evolution Infectious diseases


Titre Trier par citations Trier par année Trier par titre	Citée par Citée par	Année
A human gut microbial gene catalogue established by metagenomic sequencing J Qin, R Li, J Raes, M Arumugam, KS Burgdorf, C Manichanh, T Nielsen, ... nature 464 (7285), 59-65, 2010	13872	2010
Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence ST Cole, R Brosch, J Parkhill, T Garnier, C Churcher, D Harris, SV Gordon, ... Nature 396 (6707), 190-190, 1998	10434	1998
Enterotypes of the human gut microbiome M Arumugam, J Raes, E Pelletier, D Le Paslier, T Yamada, DR Mende, ... nature 473 (7346), 174-180, 2011	8786	2011
Richness of human gut microbiome correlates with metabolic markers E Le Chatelier, T Nielsen, J Qin, E Prifti, F Hildebrand, G Falony, ... Nature 500 (7464), 541-546, 2013	5095	2013
Roary: rapid large-scale prokaryote pan genome analysis AJ Page, CA Cummins, M Hunt, VK Wong, S Reuter, MTG Holden, ... Bioinformatics 31 (22), 3691-3693, 2015	4776	2015
Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2) SD Bentley, KF Chater, AM Cerdeño-Tárraga, GL Challis, NR Thomson, ... nature 417 (6885), 141-147, 2002	4355	2002
Artemis: sequence visualization and annotation K Rutherford, J Parkhill, J Crook, T Horsnell, P Rice, MA Rajandream, ... Bioinformatics 16 (10), 944-945, 2000	3720	2000
Reagent and laboratory contamination can critically impact sequence-based microbiome analyses SJ Salter, MJ Cox, EM Turek, ST Calus, WO Cookson, MF Moffatt, ... BMC biology 12, 1-12, 2014	3258	2014
The genome sequence of the food-borne pathogen Campylobacter jejuni reveals hypervariable sequences J Parkhill, BW Wren, K Mungall, JM Ketley, C Churcher, D Basham, ... Nature 403 (6770), 665-668, 2000	2443	2000
An integrated catalog of reference genes in the human gut microbiome J Li, H Jia, X Cai, H Zhong, Q Feng, S Sunagawa, M Arumugam, ... Nature biotechnology 32 (8), 834-841, 2014	2252	2014
Massive gene decay in the leprosy bacillus ST Cole, K Eiglmeier, J Parkhill, KD James, NR Thomson, PR Wheeler, ... Nature 409 (6823), 1007-1011, 2001	2250	2001
Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins NJ Croucher, AJ Page, TR Connor, AJ Delaney, JA Keane, SD Bentley, ... Nucleic acids research 43 (3), e15-e15, 2015	2228	2015
Dominant and diet-responsive groups of bacteria within the human colonic microbiota AW Walker, J Ince, SH Duncan, LM Webster, G Holtrop, X Ze, D Brown, ... The ISME journal 5 (2), 220-230, 2011	2010	2011
ACT: the Artemis comparison tool TJ Carver, KM Rutherford, M Berriman, MA Rajandream, BG Barrell, ... Bioinformatics 21 (16), 3422-3423, 2005	1873	2005
Genome sequence of Yersinia pestis, the causative agent of plague J Parkhill, BW Wren, NR Thomson, RW Titball, MTG Holden, MB Prentice, ... Nature 413 (6855), 523-527, 2001	1553	2001
Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18 J Parkhill, G Dougan, KD James, NR Thomson, D Pickard, J Wain, ... Nature 413 (6858), 848-852, 2001	1532	2001
The minimum information about a genome sequence (MIGS) specification D Field, G Garrity, T Gray, N Morrison, J Selengut, P Sterk, T Tatusova, ... Nature biotechnology 26 (5), 541-547, 2008	1381	2008
Out-of-Africa migration and Neolithic coexpansion of Mycobacterium tuberculosis with modern humans I Comas, M Coscolla, T Luo, S Borrell, KE Holt, M Kato-Maeda, J Parkhill, ... Nature genetics 45 (10), 1176-1182, 2013	1350	2013
The complete genome sequence of Mycobacterium bovis T Garnier, K Eiglmeier, JC Camus, N Medina, H Mansoor, M Pryor, ... Proceedings of the National Academy of Sciences 100 (13), 7877-7882, 2003	1339	2003
Evolution of MRSA during hospital transmission and intercontinental spread SR Harris, EJ Feil, MTG Holden, MA Quail, EK Nickerson, N Chantratita, ... Science 327 (5964), 469-474, 2010	1303	2010

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