| Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ... Nature biotechnology 37 (8), 852-857, 2019 | 17380 | 2019 |
| Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking M Wang, JJ Carver, VV Phelan, LM Sanchez, N Garg, Y Peng, ... Nature biotechnology 34 (8), 828-837, 2016 | 3770 | 2016 |
| Feature-based molecular networking in the GNPS analysis environment LF Nothias, D Petras, R Schmid, K Dührkop, J Rainer, A Sarvepalli, ... Nature methods 17 (9), 905-908, 2020 | 1070 | 2020 |
| QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science E Bolyen, JR Rideout, MR Dillon, NA Bokulich, C Abnet, GA Al-Ghalith, ... PeerJ Preprints, 2018 | 1036 | 2018 |
| American gut: an open platform for citizen science microbiome research D McDonald, E Hyde, JW Debelius, JT Morton, A Gonzalez, G Ackermann, ... Msystems 3 (3), 10.1128/msystems. 00031-18, 2018 | 752 | 2018 |
| Illuminating the dark matter in metabolomics RR Silva, PC Dorrestein, RA Quinn Proceedings of the National Academy of Sciences of the United States of America, 2015 | 546 | 2015 |
| Global chemical effects of the microbiome include new bile-acid conjugations RA Quinn, AV Melnik, A Vrbanac, T Fu, KA Patras, MP Christy, Z Bodai, ... Nature 579 (7797), 123-129, 2020 | 474 | 2020 |
| Bioactivity-Based Molecular Networking for the Discovery of Drug Leads in Natural Product Bioassay-Guided Fractionation LF Nothias, M Nothias-Esposito, R da Silva, M Wang, I Protsyuk, Z Zhang, ... J. Nat. Prod., 2018 | 365 | 2018 |
| Propagating annotations of molecular networks using in silico fragmentation RR da Silva, M Wang, LF Nothias, JJJ van der Hooft, ... PLoS Comput Biol, 2018 | 341 | 2018 |
| Mass spectrometry in plant metabolomics strategies: from analytical platforms to data acquisition and processing M Ernst, DB Silva, RR Silva, RZN Vêncio, NP Lopes Natural product reports 31 (6), 784-806, 2014 | 226 | 2014 |
| Global chemical analysis of biology by mass spectrometry AA Aksenov, R da Silva, R Knight, NP Lopes, PC Dorrestein Nature Reviews Chemistry 1 (7), 0054, 2017 | 219 | 2017 |
| Mass spectrometry searches using MASST M Wang, AK Jarmusch, F Vargas, AA Aksenov, JM Gauglitz, K Weldon, ... Nature biotechnology 38 (1), 23-26, 2020 | 216 | 2020 |
| The impact of skin care products on skin chemistry and microbiome dynamics BMC Biology, 2019 | 193 | 2019 |
| Convergent evolution of pain-inducing defensive venom components in spitting cobras Science, 2021 | 132 | 2021 |
| Prioritizing Natural Product Diversity in a Collection of 146 Bacterial Strains Based on Growth and Extraction Protocols M Crüsemann, EC O’Neill, CB Larson, AV Melnik, DJ Floros, RR da Silva, ... Journal of Natural Products, 2016 | 132 | 2016 |
| High-resolution liquid chromatography tandem mass spectrometry enables large scale molecular characterization of dissolved organic matter D Petras, I Koester, R Da Silva, BM Stephens, AF Haas, CE Nelson, ... Frontiers in Marine Science 4, 405, 2017 | 128 | 2017 |
| Three-Dimensional Microbiome and Metabolome Cartography of a Diseased Human Lung Cell Host & Microbe, 2017 | 120 | 2017 |
| Coupling targeted and untargeted mass spectrometry for metabolome-microbiome-wide association studies of human fecal samples AV Melnik, RR da Silva, ER Hyde, AA Aksenov, F Vargas, A Bouslimani, ... Analytical Chemistry, 2017 | 90 | 2017 |
| Lifestyle chemistries from phones for individual profiling A Bouslimania, AV Melnik, Z Xu, A Amir, RR da Silva, M Wang, ... Proceedings of the National Academy of Sciences, 2016 | 76 | 2016 |
| Comprehensive mass spectrometry‐guided phenotyping of plant specialized metabolites reveals metabolic diversity in the cosmopolitan plant family Rhamnaceae KB Kang, M Ernst, JJJ van der Hooft, RR da Silva, J Park, MH Medema, ... The Plant Journal 98 (6), 1134-1144, 2019 | 73 | 2019 |
Pieter C DorresteinUCSDAdresse e-mail validée de ucsd.edu
