| Analysing high-throughput sequencing data in Python with HTSeq 2.0 GH Putri, S Anders, PT Pyl, JE Pimanda, F Zanini Bioinformatics 38 (10), 2943-2945, 2022 | 601 | 2022 |
| Integrated immune dynamics define correlates of COVID-19 severity and antibody responses M Koutsakos, LC Rowntree, L Hensen, BY Chua, CE Van De Sandt, ... Cell Reports Medicine 2 (3), 2021 | 155 | 2021 |
| Integration, exploration, and analysis of high‐dimensional single‐cell cytometry data using Spectre TM Ashhurst, F Marsh‐Wakefield, GH Putri, AG Spiteri, D Shinko, ... Cytometry Part A 101 (3), 237-253, 2022 | 127 | 2022 |
| ChronoClust: Density-based clustering and cluster tracking in high-dimensional time-series data GH Putri, MN Read, I Koprinska, D Singh, U Röhm, TM Ashhurst, ... Knowledge-Based Systems 174, 9-26, 2019 | 25 | 2019 |
| Library size confounds biology in spatial transcriptomics data DD Bhuva, CW Tan, A Salim, C Marceaux, MA Pickering, J Chen, ... Genome Biology 25 (1), 99, 2024 | 15 | 2024 |
| Peripheral B‐cell dysregulation is associated with relapse after long‐term quiescence in patients with multiple sclerosis F Marsh‐Wakefield, P Juillard, TM Ashhurst, A Juillard, D Shinko, GH Putri, ... Immunology and cell biology 100 (6), 453-467, 2022 | 15 | 2022 |
| Profiling apache HIVE query from run time logs GP Haryono, Y Zhou 2016 International Conference on Big Data and Smart Computing (BigComp), 61-68, 2016 | 6 | 2016 |
| Using single-cell cytometry to illustrate integrated multi-perspective evaluation of clustering algorithms using Pareto fronts GH Putri, I Koprinska, TM Ashhurst, NJC King, MN Read Bioinformatics 37 (14), 1972-1981, 2021 | 3 | 2021 |
| Dimensionality reduction for clustering and cluster tracking of cytometry data GH Putri, MN Read, I Koprinska, TM Ashhurst, NJC King Artificial Neural Networks and Machine Learning–ICANN 2019: Text and Time …, 2019 | 3 | 2019 |
| SuperCellCyto: enabling efficient analysis of large scale cytometry datasets GH Putri, G Howitt, F Marsh-Wakefield, TM Ashhurst, B Phipson Genome Biology 25 (1), 89, 2024 | 2 | 2024 |
| Extraction and quantification of lineage-tracing barcodes with NextClone and CloneDetective GH Putri, N Pires, NM Davidson, C Blyth, AM Al’Khafaji, S Goel, ... bioRxiv, 2023.11. 19.567755, 2023 | 2 | 2023 |
| Spatial mapping of the HCC landscape identifies unique intratumoral perivascular-immune neighborhoods F Marsh-Wakefield, C Santhakumar, AL Ferguson, TM Ashhurst, JS Shin, ... Hepatology Communications 8 (11), e0540, 2024 | | 2024 |
| Spatial mapping of the hepatocellular carcinoma landscape identifies unique intratumoural perivascular-immune neighbourhoods F Marsh-Wakefield, C Santhakumar, AL Ferguson, TM Ashhurst, JS Shin, ... medRxiv, 2024 | | 2024 |
| TrackSOM: Mapping immune response dynamics through clustering of time‐course cytometry data GH Putri, J Chung, DN Edwards, F Marsh‐Wakefield, I Koprinska, ... Cytometry Part A 103 (1), 54-70, 2023 | | 2023 |
| Revealing the Development of Immune Response through Temporal Dynamic Clustering GH Putri | | 2021 |
| Efficient Cell Type Label Transfer Between CITEseq and Cytometry Data G Putri | | |
Thomas M. AshhurstThe University of SydneyAdresse e-mail validée de sydney.edu.au