Ilya Nemenman

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Coauteurs

Chris H WigginsAssociate Professor, Columbia UniversityAdresse e-mail validée de columbia.edu
Andrea CalifanoColumbia Adresse e-mail validée de c2b2.columbia.edu
William BialekPrinceton UniversityAdresse e-mail validée de Princeton.EDU
Riccardo Dalla FaveraProfessor of GeneticsAdresse e-mail validée de columbia.edu
Andre LevchenkoJohn C. Malone Professor of Biomedical Engineering, Director of Yale Systems Biology Institute, YaleAdresse e-mail validée de yale.edu
Sam SoberEmory UniversityAdresse e-mail validée de emory.edu
Bryan DanielsAssistant Professor, Arizona State UniversityAdresse e-mail validée de asu.edu
Gustavo StolovitzkyDirector, Biomed Data Sciences Hub, NYU Langone Health; Prof. Pathology Dep, NYU School of MedicineAdresse e-mail validée de nyulangone.org
Michael E. WallResearch Scientist, Los Alamos National LaboratoryAdresse e-mail validée de lanl.gov
Nikolai SinitsynLos Alamos National LaboratoryAdresse e-mail validée de lanl.gov
William S. HlavacekTheoretical Division, Los Alamos National LaboratoryAdresse e-mail validée de lanl.gov
Andrew MuglerAssociate Professor, Department of Physics and Astronomy, University of PittsburghAdresse e-mail validée de pitt.edu
Caroline M. HolmesHarvard UniversityAdresse e-mail validée de fas.harvard.edu
Brian MunskyColorado State UniversityAdresse e-mail validée de colostate.edu
Rob de Ruyter van SteveninckProfessor of Physics and Neuroscience, Indiana UniversityAdresse e-mail validée de indiana.edu
William S. RyuDepartment of Physics, Donnelly Center, University of TorontoAdresse e-mail validée de physics.utoronto.ca
Alex RheeBiomedical Engineering PhD student, Johns Hopkins UniversityAdresse e-mail validée de jhmi.edu
Bruce R. LevinProfessor, Department of Biology, Emory UniversityAdresse e-mail validée de emory.edu
Vijay SinghNorth Carolina A&T State UniversityAdresse e-mail validée de ncat.edu
Lina MerchanSavannah State UniversityAdresse e-mail validée de savannahstate.edu

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Ilya Nemenman

Emory University, Physics and Biology

Adresse e-mail validée de emory.edu - Page d'accueil

theoretical biophysics quantitative biology complex systems q-bio computational and theoretical neuroscience


Titre Trier par citations Trier par année Trier par titre	Citée par Citée par	Année
ARACNE: an algorithm for the reconstruction of gene regulatory networks in a mammalian cellular context A Margolin, I Nemenman, K Basso, C Wiggins, G Stolovitzky, R Favera, ... BMC bioinformatics 7 (Suppl 1), S7, 2006	3295	2006
Predictability, complexity, and learning W Bialek, I Nemenman, N Tishby Neural Computation 13 (11), 2409-2463, 2001	698	2001
Information Transduction Capacity of Noisy Biochemical Signaling Networks R Cheong, A Rhee, CJ Wang, I Nemenman, A Levchenko Science 334 (6054), 354-358, 2011	592	2011
Reverse engineering cellular networks AA Margolin, K Wang, WK Lim, M Kustagi, I Nemenman, A Califano Nature Protocols 1 (2), 662-671, 2006	459	2006
Entropy and inference, revisited I Nemenman, F Shafee, W Bialek Adv. Neural Inf. Proc. Syst. 14, 2001	374*	2001
Entropy and information in neural spike trains: Progress on the sampling problem I Nemenman, W Bialek, RDR Van Steveninck Physical Review E 69 (5), 056111, 2004	337	2004
Genome-wide identification of post-translational modulators of transcription factor activity in human B cells K Wang, M Saito, BC Bisikirska, MJ Alvarez, WK Lim, P Rajbhandari, ... Nature biotechnology 27 (9), 829-837, 2009	286	2009
Automated adaptive inference of phenomenological dynamical models BC Daniels, I Nemenman Nature communications 6 (1), 8133, 2015	249	2015
Neural coding of natural stimuli: information at sub-millisecond resolution I Nemenman, GD Lewen, W Bialek, RRR van Steveninck PLoS computational biology 4 (3), e1000025, 2008	185	2008
Cell–cell communication enhances the capacity of cell ensembles to sense shallow gradients during morphogenesis D Ellison, A Mugler, MD Brennan, SH Lee, RJ Huebner, ER Shamir, ... Proceedings of the National Academy of Sciences 113 (6), E679-E688, 2016	168	2016
The Berry phase and the pump flux in stochastic chemical kinetics NA Sinitsyn, I Nemenman EPL (Europhysics Letters) 77, 58001, 2007	163	2007
Optimal signal processing in small stochastic biochemical networks E Ziv, I Nemenman, CH Wiggins PLoS One 2 (10), e1077, 2007	156	2007
Cellular noise and information transmission A Levchenko, I Nemenman Current opinion in biotechnology 28, 156-164, 2014	149	2014
Zipf's law and criticality in multivariate data without fine-tuning DJ Schwab, I Nemenman, P Mehta Physical Review Letters 113, 068102, 2014	147	2014
Motor control by precisely timed spike patterns KH Srivastava, CM Holmes, M Vellema, AR Pack, CPH Elemans, ... Proceedings of the National Academy of Sciences 114 (5), 1171-1176, 2017	130	2017
The simplicity of completion time distributions for common complex biochemical processes G Bel, B Munsky, I Nemenman Physical biology 7, 016003, 2010	122	2010
Universal geometric theory of mesoscopic stochastic pumps and reversible ratchets NA Sinitsyn, I Nemenman Physical review letters 99 (22), 220408, 2007	121	2007
Efficient inference of parsimonious phenomenological models of cellular dynamics using S-systems and alternating regression BC Daniels, I Nemenman PloS one 10 (3), e0119821, 2015	103	2015
Complexity through nonextensivity W Bialek, I Nemenman, N Tishby Physica A: Statistical Mechanics and its Applications 302 (1-4), 89-99, 2001	102	2001
Limits to the precision of gradient sensing with spatial communication and temporal integration A Mugler, A Levchenko, I Nemenman Proceedings of the National Academy of Sciences 113 (6), E689-E695, 2016	85	2016

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