Articles avec mandats d'accès public - Fengchao YuEn savoir plus
Non disponibles : 2
In planta chemical cross‐linking and mass spectrometry analysis of protein structure and interaction in Arabidopsis
X Zhu, F Yu, Z Yang, S Liu, C Dai, X Lu, C Liu, W Yu, N Li
Proteomics 16 (13), 1915-1927, 2016
Exigences : Research Grants Council, Hong Kong
Implementing the MSFragger Search Engine as a Node in Proteome Discoverer
HY Chang, SE Haynes, F Yu, AI Nesvizhskii
Journal of Proteome Research 22 (2), 520-525, 2022
Exigences : US National Institutes of Health
Disponibles quelque part : 37
IonQuant enables accurate and sensitive label-free quantification with FDR-controlled match-between-runs
F Yu, SE Haynes, AI Nesvizhskii
Molecular & Cellular Proteomics 20, 2021
Exigences : US National Institutes of Health
Proteogenomic insights into the biology and treatment of HPV-negative head and neck squamous cell carcinoma
C Huang, L Chen, SR Savage, RV Eguez, Y Dou, Y Li, ...
Cancer cell 39 (3), 361-379. e16, 2021
Exigences : US National Institutes of Health, Cancer Prevention Research Institute of …
Fast quantitative analysis of timsTOF PASEF data with MSFragger and IonQuant
F Yu, SE Haynes, GC Teo, DM Avtonomov, DA Polasky, AI Nesvizhskii
Molecular & Cellular Proteomics, 2020
Exigences : US National Institutes of Health
dia-PASEF data analysis using FragPipe and DIA-NN for deep proteomics of low sample amounts
V Demichev, L Szyrwiel, F Yu, GC Teo, G Rosenberger, A Niewienda, ...
Nature Communications 13 (1), 1-8, 2022
Exigences : US National Institutes of Health, UK Biotechnology and Biological Sciences …
Identification of modified peptides using localization-aware open search
F Yu, GC Teo, AT Kong, SE Haynes, DM Avtonomov, DJ Geiszler, ...
Nature communications 11 (1), 4065, 2020
Exigences : US National Institutes of Health
Fast and Comprehensive N-and O-glycoproteomics analysis with MSFragger-Glyco
DA Polasky, F Yu, GC Teo, AI Nesvizhskii
Nature Methods, 2020
Exigences : US National Institutes of Health
Fast Deisotoping Algorithm and Its Implementation in the MSFragger Search Engine
GC Teo, DA Polasky, F Yu, AI Nesvizhskii
Journal of Proteome Research 20 (1), 498-505, 2020
Exigences : US National Institutes of Health
PTM-Shepherd: analysis and summarization of post-translational and chemical modifications from open search results
DJ Geiszler, AT Kong, DM Avtonomov, F Yu, F da Veiga Leprevost, ...
Molecular & Cellular Proteomics 20, 100018, 2021
Exigences : US National Institutes of Health
Analysis of DIA proteomics data using MSFragger-DIA and FragPipe computational platform
F Yu, GC Teo, AT Kong, K Fröhlich, GX Li, V Demichev, AI Nesvizhskii
Nature Communications 14 (1), 4154, 2023
Exigences : US National Institutes of Health, Federal Ministry of Education and Research …
MSBooster: improving peptide identification rates using deep learning-based features
KL Yang, F Yu, GC Teo, K Li, V Demichev, M Ralser, AI Nesvizhskii
Nature Communications 14 (1), 4539, 2023
Exigences : US National Institutes of Health
Profiling the proteome-wide selectivity of diverse electrophiles
PRA Zanon, F Yu, P Musacchio, L Lewald, M Zollo, K Krauskopf, ...
Exigences : US National Institutes of Health, German Research Foundation
Post-translational modifications reshape the antigenic landscape of the MHC I immunopeptidome in tumors
A Kacen, A Javitt, MP Kramer, D Morgenstern, T Tsaban, MD Shmueli, ...
Nature biotechnology 41 (2), 239-251, 2023
Exigences : US National Institutes of Health, European Commission
High sensitivity dia-PASEF proteomics with DIA-NN and FragPipe
V Demichev, F Yu, GC Teo, L Szyrwiel, GA Rosenberger, J Decker, ...
Biorxiv, 2021.03. 08.434385, 2021
Exigences : US National Institutes of Health, UK Biotechnology and Biological Sciences …
Establishment of Dimethyl Labeling-based Quantitative Acetylproteomics in Arabidopsis
S Liu, F Yu, Z Yang, T Wang, H Xiong, C Chang, W Yu, N Li
Molecular & Cellular Proteomics 17 (5), 1010-1027, 2018
Exigences : National Natural Science Foundation of China, Research Grants Council, Hong Kong
SP3-Enabled Rapid and High Coverage Chemoproteomic Identification of Cell-State–Dependent Redox-Sensitive Cysteines
HS Desai, T Yan, F Yu, AW Sun, M Villanueva, AI Nesvizhskii, KM Backus
Molecular & Cellular Proteomics 21 (4), 2022
Exigences : US National Institutes of Health
PIPI: PTM-invariant peptide identification using coding method
F Yu, N Li, W Yu
Journal of proteome research 15 (12), 4423-4435, 2016
Exigences : Research Grants Council, Hong Kong
Multiattribute Glycan Identification and FDR Control for Glycoproteomics
DA Polasky, DJ Geiszler, F Yu, AI Nesvizhskii
Molecular & Cellular Proteomics 21 (3), 2022
Exigences : US National Institutes of Health
Exhaustively Identifying Cross-Linked Peptides with a Linear Computational Complexity
F Yu, N Li, W Yu
Journal of proteome research 16 (10), 3942-3952, 2017
Exigences : National Natural Science Foundation of China, Research Grants Council, Hong Kong
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