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Emile Mathieu
Emile Mathieu
ML Research Scientist @ Xaira Therapeutics
Adresse e-mail validée de xaira.com - Page d'accueil
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Année
De novo design of protein structure and function with RFdiffusion
JL Watson, D Juergens, NR Bennett, BL Trippe, J Yim, HE Eisenach, ...
Nature 620 (7976), 1089-1100, 2023
9292023
Disentangling disentanglement in variational autoencoders
E Mathieu, T Rainforth, N Siddharth, YW Teh
International conference on machine learning, 4402-4412, 2019
3562019
Continuous Hierarchical Representations with Poincaré Variational Auto-Encoders
E Mathieu, C Le Lan, CJ Maddison, R Tomioka, YW Teh
Advances in neural information processing systems, 12544-12555, 2019
233*2019
Broadly applicable and accurate protein design by integrating structure prediction networks and diffusion generative models
JL Watson, D Juergens, NR Bennett, BL Trippe, J Yim, HE Eisenach, ...
BioRxiv, 2022.12. 09.519842, 2022
2122022
SE (3) diffusion model with application to protein backbone generation
J Yim, BL Trippe, V De Bortoli, E Mathieu, A Doucet, R Barzilay, ...
arXiv preprint arXiv:2302.02277, 2023
1882023
Riemannian score-based generative modelling
V De Bortoli, E Mathieu, M Hutchinson, J Thornton, YW Teh, A Doucet
Advances in Neural Information Processing Systems 35, 2406-2422, 2022
1832022
Riemannian continuous normalizing flows
E Mathieu, M Nickel
Advances in Neural Information Processing Systems 33, 2503-2515, 2020
1212020
Diffusion models for constrained domains
N Fishman, L Klarner, V De Bortoli, E Mathieu, M Hutchinson
arXiv preprint arXiv:2304.05364, 2023
332023
Improved motif-scaffolding with SE (3) flow matching
J Yim, A Campbell, E Mathieu, AYK Foong, M Gastegger, J Jiménez-Luna, ...
ArXiv, arXiv: 2401.04082 v2, 2024
272024
Riemannian score-based generative modelling
VD Bortoli, E Mathieu, MJ Hutchinson, J Thornton, YW Teh, A Doucet
Advances in Neural Information Processing Systems, 46, 2022
232022
Riemannian diffusion schr\" odinger bridge
J Thornton, M Hutchinson, E Mathieu, V De Bortoli, YW Teh, A Doucet
arXiv preprint arXiv:2207.03024, 2022
182022
SE (3) equivariant augmented coupling flows
L Midgley, V Stimper, J Antorán, E Mathieu, B Schölkopf, ...
Advances in Neural Information Processing Systems 36, 2024
172024
On contrastive representations of stochastic processes
E Mathieu, A Foster, Y Teh
Advances in Neural Information Processing Systems 34, 28823-28835, 2021
172021
A dynamic simulation model to support reduction in illegal trade within legal wildlife markets
R Oyanedel, S Gelcich, E Mathieu, EJ Milner‐Gulland
Conservation Biology 36 (2), e13814, 2022
142022
On incorporating inductive biases into vaes
N Miao, E Mathieu, N Siddharth, YW Teh, T Rainforth
arXiv preprint arXiv:2106.13746, 2021
14*2021
Metropolis sampling for constrained diffusion models
N Fishman, L Klarner, E Mathieu, M Hutchinson, V De Bortoli
Advances in Neural Information Processing Systems 36, 2024
132024
A framework for conditional diffusion modelling with applications in motif scaffolding for protein design
K Didi, F Vargas, SV Mathis, V Dutordoir, E Mathieu, UJ Komorowska, ...
arXiv preprint arXiv:2312.09236, 2023
132023
Spectral diffusion processes
A Phillips, T Seror, M Hutchinson, V De Bortoli, A Doucet, E Mathieu
arXiv preprint arXiv:2209.14125, 2022
132022
Learning instance-specific data augmentations
N Miao, E Mathieu, Y Dubois, T Rainforth, YW Teh, A Foster, H Kim
arXiv preprint arXiv:2206.00051, 2022
13*2022
Sampling and inference for beta neutral-to-the-left models of sparse networks
B Bloem-Reddy, A Foster, E Mathieu, YW Teh
arXiv preprint arXiv:1807.03113, 2018
112018
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